RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 EEF1E1O43324 174 aaKnown RBP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 PLOD3O60568 738 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 ACTL6AO96019 429 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 MYL2P10916 166 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 CPN1P15169 458 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 DDCP20711 480 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 GRK2P25098 689 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 SRYQ05066 204 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 C2orf80Q0P641 193 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 HEPACAMQ14CZ8 416 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 ZNF385BQ569K4 471 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 CLEC6AQ6EIG7 209 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 ANKRD26P1Q6NSI1 321 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 LARP4Q71RC2 724 aaKnown RBP eCLIP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 IFNEQ86WN2 208 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 PLCZ1Q86YW0 608 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 SLC44A2Q8IWA5 706 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 TRIM42Q8IWZ5 723 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 GCNT2Q8N0V5 402 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 OR2T11Q8NH01 316 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 OR14L1PQ8NHC6 308 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 ERP27Q96DN0 273 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 EGLN2Q96KS0 407 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 POLDIP3Q9BY77 421 aaKnown RBP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 CLEC4MQ9H2X3 399 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 GLIPR2Q9H4G4 154 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 MYNNQ9NPC7 610 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 RASSF1Q9NS23 344 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 TAS2R10Q9NYW0 307 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 STK38LQ9Y2H1 464 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 RPH3AQ9Y2J0 694 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 RAI1Q7Z5J4 1906 aaPredicted RBP10.56□□□□□ -0.72
VTI1A-208ENST00000494728 ARID1AO14497 2285 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 H0Y3Z8 333 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 H0YC42 278 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 KIF2AO00139 706 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 UPK1AO00322 258 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 PLOD2O00469 737 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 SCO2O43819 266 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 ZIC3O60481 467 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 CDH16O75309 829 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 CBR3O75828 277 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 TGM6O95932 706 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 IL2RAP01589 272 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 TMIGD3P0DMS9 266 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 ZNF708P17019 499 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 CTSSP25774 331 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 IL12BP29460 328 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 SRD5A2P31213 254 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 EVI2BP34910 448 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 NCBP2P52298 156 aaKnown RBP eCLIP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 TPD52P55327 224 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 CLDN15P56746 228 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 PCLAFQ15004 111 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 KIAA0040Q15053 153 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 ERCC6LQ2NKX8 1250 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 SH2D4BQ5SQS7 431 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 C4orf33Q8N1A6 199 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 FADS6Q8N9I5 356 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 LINC01560Q8TB33 94 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 ZPLD1Q8TCW7 415 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 GFM2Q969S9 779 aaKnown RBP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 SFXN2Q96NB2 322 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 AMDHD1Q96NU7 426 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 BBS4Q96RK4 519 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 TUBB1Q9H4B7 451 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 CALHM2Q9HA72 323 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 CCM2LQ9NUG4 571 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 OXSMQ9NWU1 459 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 SENP1Q9P0U3 644 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 DCDC2Q9UHG0 476 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 C19orf53Q9UNZ5 99 aaPredicted RBP10.55□□□□□ -0.72
VTI1A-208ENST00000494728 PLEKHA6Q9Y2H5 1048 aa10.55□□□□□ -0.72
VTI1A-208ENST00000494728 A0A087WV62 115 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 GXYLT2A0PJZ3 443 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 TMEM233B4DJY2 109 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 FADS1O60427 444 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 TNFSF13O75888 250 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 RSL1D1O76021 490 aaKnown RBP10.54□□□□□ -0.72
VTI1A-208ENST00000494728 IGKV1D-16P01601 117 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 CRHR1P34998 444 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 DGKQP52824 942 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 PNLIPRP2P54317 469 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 DNAJB13P59910 316 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 STX5Q13190 355 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 RCAN2Q14206 197 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 NOXRED1Q6NXP6 359 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 ZNF551Q7Z340 670 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-208ENST00000494728 LUZP2Q86TE4 346 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 CDC20BQ86Y33 519 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 OR2L13Q8N349 312 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 OR2M3Q8NG83 312 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 OR5M1Q8NGP8 315 aa10.54□□□□□ -0.72
VTI1A-208ENST00000494728 OR2W6PQ8NHA6 318 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms