RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 QPCTLQ9NXS2 382 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 NPFFR2Q9Y5X5 522 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
ERCC3-209ENST00000494464 ATP6AP2A0A1C7CYW4 349 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 LRRC3CA6NJW4 275 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 AQP7O14520 342 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 SUSD5O60279 629 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 PEX11AO75192 247 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ATP6AP2O75787 350 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 CBX7O95931 251 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ANXA4P09525 319 aaPredicted RBP12.11□□□□□ -0.47
ERCC3-209ENST00000494464 LINC00032P0C843 101 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 NAGAP17050 411 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 PRPH2P23942 346 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 NUDT2P50583 147 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 DUSP8Q13202 625 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF628Q5EBL2 1059 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 TMEM81Q6P7N7 255 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 SCIMPQ6UWF3 145 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 TRILQ7L0X0 811 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 PGAM4Q8N0Y7 254 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 MIER2Q8N344 545 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 TSPEARQ8WU66 669 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 RCN3Q96D15 328 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF597Q96LX8 424 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 THTPAQ9BU02 230 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 EBPLQ9BY08 206 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ITPAQ9BY32 194 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 NXF5Q9H1B4 397 aaKnown RBP12.11□□□□□ -0.47
ERCC3-209ENST00000494464 EFCAB1Q9HAE3 211 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ZFP64Q9NPA5 681 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 AIG1Q9NVV5 245 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 PRODH2Q9UF12 536 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 SLC7A8Q9UHI5 535 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 DTX4Q9Y2E6 619 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 WBP11Q9Y2W2 641 aaKnown RBP12.11□□□□□ -0.47
ERCC3-209ENST00000494464 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 PTGDR2Q9Y5Y4 395 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 CRYBG3Q68DQ2 2970 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF407Q9C0G0 2248 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 BCKDKO14874 412 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 ACOX3O15254 700 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 HCN1O60741 890 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 TRIM3O75382 744 aaPredicted RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 PDE9AO76083 593 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 SNRPB2P08579 225 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 DDCP20711 480 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 ABCD3P28288 659 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 FBXW4P57775 412 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 DCAF7P61962 342 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 RPP38P78345 283 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 EXOSC7Q15024 291 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 LTB4RQ15722 352 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF630Q2M218 657 aaPredicted RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 PDCD4Q53EL6 469 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 AGKQ53H12 422 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 EMC4Q5J8M3 183 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 FAM180BQ6P0A1 224 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 HACD2Q6Y1H2 254 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 DEFB107AQ8IZN7 70 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 ADCY4Q8NFM4 1077 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 OR52R1Q8NGF1 315 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 OR2T11Q8NH01 316 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 SPPL2AQ8TCT8 520 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 DIO2Q92813 273 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 EXOSC8Q96B26 276 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 HSPBAP1Q96EW2 488 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 LCORQ96JN0 433 aaPredicted RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 DOHHQ9BU89 302 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 MYNNQ9NPC7 610 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 CHST11Q9NPF2 352 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 B4GALT7Q9UBV7 327 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 BCAP29Q9UHQ4 241 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 CCL27Q9Y4X3 112 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 GPR45Q9Y5Y3 372 aa12.1□□□□□ -0.47
ERCC3-209ENST00000494464 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
ERCC3-209ENST00000494464 FRG2CA6NGY1 282 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 SLC28A1O00337 649 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 AIM2O14862 343 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 PPM1BO75688 479 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 BCAS2O75934 225 aaPredicted RBP12.09□□□□□ -0.47
ERCC3-209ENST00000494464 SLITRK5O94991 958 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 SNX4O95219 450 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 CLDN14O95500 239 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 CELA3AP09093 270 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 PCSK2P16519 638 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 PPICP45877 212 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 EMDP50402 254 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 ACTR3P61158 418 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 MRPS35P82673 323 aaKnown RBP12.09□□□□□ -0.47
ERCC3-209ENST00000494464 SLC10A1Q14973 349 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 KPNB1Q14974 876 aaKnown RBP12.09□□□□□ -0.47
ERCC3-209ENST00000494464 ATP6AP1LQ52LC2 224 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms