RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 WDR4P57081 412 aaKnown RBP20.68■□□□□ 0.9
SNIP1-203ENST00000493916 MAGOHP61326 146 aaKnown RBP20.68■□□□□ 0.9
SNIP1-203ENST00000493916 EMX2Q04743 252 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 ZNHIT3Q15649 155 aaPredicted RBP20.68■□□□□ 0.9
SNIP1-203ENST00000493916 TMEM211Q6ICI0 200 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 ANGPTL8Q6UXH0 198 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 MARVELD2Q8N4S9 558 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 OR4N2Q8NGD1 307 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 OR1J4Q8NGS1 313 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 HOXB13Q92826 284 aaPredicted RBP20.68■□□□□ 0.9
SNIP1-203ENST00000493916 PAIP2Q9BPZ3 127 aaKnown RBP20.68■□□□□ 0.9
SNIP1-203ENST00000493916 SLC6A15Q9H2J7 730 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 Q9N2J8 555 aa20.68■□□□□ 0.9
SNIP1-203ENST00000493916 EIF3LQ9Y262 564 aaKnown RBP20.68■□□□□ 0.9
SNIP1-203ENST00000493916 NCKAP5O14513 1909 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 FIGNL2A6NMB9 653 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 PRPS1L1P21108 318 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 DCTP40126 519 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 C21orf58P58505 322 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 BST1Q10588 318 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 CASP8Q14790 479 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 CRYBG3Q68DQ2 2970 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 OR7A2PQ8NGA2 310 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 OR5M9Q8NGP3 310 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 ATAD3AQ9NVI7 634 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 NOP53Q9NZM5 478 aaKnown RBP20.67■□□□□ 0.9
SNIP1-203ENST00000493916 ACAD8Q9UKU7 415 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 CBLCQ9ULV8 474 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 PCDHGB3Q9Y5G1 929 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 ZNF407Q9C0G0 2248 aa20.67■□□□□ 0.9
SNIP1-203ENST00000493916 MAST4O15021 2626 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 PRSS44E7EML9 344 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 GNB5O14775 395 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 ACVR2AP27037 513 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 MAP3K8P41279 467 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 WLSQ5T9L3 541 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 CPTPQ5TA50 214 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 RIMKLAQ8IXN7 391 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 LRRC34Q8IZ02 419 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 NATD1Q8N6N6 113 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 CEP70Q8NHQ1 597 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 EFHD2Q96C19 240 aaPredicted RBP20.66■□□□□ 0.9
SNIP1-203ENST00000493916 MS4A4EQ96PG1 132 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 TNFRSF10DQ9UBN6 386 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 WIF1Q9Y5W5 379 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 CELSR2Q9HCU4 2923 aa20.66■□□□□ 0.9
SNIP1-203ENST00000493916 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 WDR1O75083 606 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 TRAPPC6AO75865 159 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 LAMP1P11279 417 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 G6PDP11413 515 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 TRPC1P48995 793 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 GAB1Q13480 694 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 DECR1Q16698 335 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 ZNF630Q2M218 657 aaPredicted RBP20.65■□□□□ 0.9
SNIP1-203ENST00000493916 VPS26BQ4G0F5 336 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 WDR53Q7Z5U6 358 aaPredicted RBP20.65■□□□□ 0.9
SNIP1-203ENST00000493916 RPRMLQ8N4K4 120 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 CDRT4Q8N9R6 151 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 WDSUB1Q8N9V3 476 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 RAB3IL1Q8TBN0 382 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 COQ8BQ96D53 544 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 GIMAP5Q96F15 307 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 PRPF18Q99633 342 aaKnown RBP20.65■□□□□ 0.9
SNIP1-203ENST00000493916 AKTIPQ9H8T0 292 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 C3orf14Q9HBI5 128 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 MRTO4Q9UKD2 239 aaKnown RBP20.65■□□□□ 0.9
SNIP1-203ENST00000493916 ABCG2Q9UNQ0 655 aa20.65■□□□□ 0.9
SNIP1-203ENST00000493916 EMC8O43402 210 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 CLDN14O95500 239 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 IL33O95760 270 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 HOXD4P09016 255 aaPredicted RBP20.64■□□□□ 0.89
SNIP1-203ENST00000493916 CYP4B1P13584 511 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 GAS1P54826 345 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 NHSL2Q5HYW2 709 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 ZNF787Q6DD87 383 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 ZNF585AQ6P3V2 769 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 ACAD11Q709F0 780 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 CAMKMTQ7Z624 323 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 KRTCAP2Q8N6L1 136 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 NUP43Q8NFH3 380 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 PSMA8Q8TAA3 256 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 PPP1R36Q96LQ0 422 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 MEAF6Q9HAF1 191 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 EQTNQ9NQ60 294 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 SIRT3Q9NTG7 399 aaPredicted RBP20.64■□□□□ 0.89
SNIP1-203ENST00000493916 NKIRAS1Q9NYS0 192 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 COQ3Q9NZJ6 369 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 MAPRE3Q9UPY8 281 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 FAM215AQ9Y5M1 114 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 CENPEQ02224 2701 aa20.64■□□□□ 0.89
SNIP1-203ENST00000493916 NINQ8N4C6 2090 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 C15orf38-AP3S2A0A0A6YYH1 394 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 A0A1W2PRB8 838 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 C2orf72A6NCS6 295 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 SNNO75324 88 aaPredicted RBP20.63■□□□□ 0.89
SNIP1-203ENST00000493916 CBR3O75828 277 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 NKX2-2O95096 273 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 GABRA1P14867 456 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 HTR1EP28566 365 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms