RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, human

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-215	ENST00000492417	MEAF6	Q9HAF1	191 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZNF160	Q9HCG1	818 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	C8orf4	Q9NR00	106 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	AIG1	Q9NVV5	245 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	EMC3	Q9P0I2	261 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	SLC7A8	Q9UHI5	535 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	FARSA	Q9Y285	508 aa	Known RBP	4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	LTBP2	Q14767	1821 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	C2orf16	Q68DN1	1984 aa		4.21	□□□□□ -1.74
TRA2B-215	ENST00000492417	C2orf72	A6NCS6	295 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	STMND1	H3BQB6	276 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	FBP2	O00757	339 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SCAMP2	O15127	329 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SEC14L5	O43304	696 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TMPRSS11D	O60235	418 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR10H3	O60404	316 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SNN	O75324	88 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CST1	P01037	141 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	FGF4	P08620	206 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CKMT1A	P12532	417 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	IFI30	P13284	250 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ETFA	P13804	333 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	POU2F1	P14859	743 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	AHCY	P23526	432 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	AZGP1	P25311	298 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SLC7A1	P30825	629 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	RORA	P35398	523 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	RPL4	P36578	427 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CLDN8	P56748	225 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	GNG2	P59768	71 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	GPR85	P60893	370 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	POU6F2	P78424	691 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CDK6	Q00534	326 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SPIB	Q01892	262 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SRY	Q05066	204 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SCN1B	Q07699	218 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	COLEC12	Q5KU26	742 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	C10orf62	Q5T681	223 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MZT2A	Q6P582	158 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	FAM131A	Q6UXB0	335 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	KCTD8	Q6ZWB6	473 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	2e-6	■□□□□ 11.1
TRA2B-215	ENST00000492417	BMP8A	Q7Z5Y6	402 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MCEMP1	Q8IX19	187 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PHC2	Q8IXK0	858 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CENPS	Q8N2Z9	138 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	METTL4	Q8N3J2	472 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ESX1	Q8N693	406 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	L3MBTL4	Q8NA19	623 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MINDY2	Q8NBR6	621 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	2e-7	■■□□□ 14.5
TRA2B-215	ENST00000492417	TUBB1	Q9H4B7	451 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TMEM185B	Q9H7F4	350 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	NEUROD4	Q9HD90	331 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PRODH2	Q9UF12	536 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CORO2B	Q9UQ03	480 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CACNA1A	O00555	2505 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	DOCK4	Q8N1I0	1966 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ACACB	O00763	2458 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417		A0A1W2PP18	115 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	UBE2QL1	A1L167	161 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	EMC8	O43402	210 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ERN1	O75460	977 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TPPP	O94811	219 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	HIST1H2AB	P04908	130 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ALPP	P05187	535 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	HMGN2	P05204	90 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CD22	P20273	847 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	GUCA1A	P43080	201 aa	Predicted RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MAGEA12	P43365	314 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CAPZA2	P47755	286 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	EPHA4	P54764	986 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	LIM2	P55344	173 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	RAB38	P57729	211 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	UBE2I	P63279	158 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CSNK2B	P67870	215 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	SERTAD2	Q14140	314 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	MYBPC3	Q14896	1274 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	AGER	Q15109	404 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZNF311	Q5JNZ3	666 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	TMEM214	Q6NUQ4	689 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	HIST3H2A	Q7L7L0	130 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	P2RY8	Q86VZ1	359 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PAQR7	Q86WK9	346 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CCDC28A	Q8IWP9	274 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CCDC36	Q8IYA8	594 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OFCC1	Q8IZS5	231 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PRSS33	Q8NF86	280 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR4D9	Q8NGE8	314 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR56A1	Q8NGH5	318 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR5L2	Q8NGL0	311 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	ZNF671	Q8TAW3	534 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PHF10	Q8WUB8	498 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	OR5P2	Q8WZ92	322 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PIK3R3	Q92569	461 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	HIST1H2AC	Q93077	130 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	THOC3	Q96J01	351 aa	Known RBP	4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	CSF3R	Q99062	836 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PHOX2B	Q99453	314 aa		4.2	□□□□□ -1.74
TRA2B-215	ENST00000492417	PDCD10	Q9BUL8	212 aa		4.2	□□□□□ -1.74

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