RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PMPCAQ10713 525 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 SLC10A1Q14973 349 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 NNATQ16517 81 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 TRMT12Q53H54 448 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 OGFOD2Q6N063 350 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 PAOXQ6QHF9 649 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 IKBIPQ70UQ0 350 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 SPATA21Q7Z572 469 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 CCDC71Q8IV32 467 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 DND1Q8IYX4 353 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 PRR22Q8IZ63 422 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 VWA5B2Q8N398 1253 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 C17orf47Q8NEP4 570 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 OR7G1Q8NGA0 311 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 SPPL2AQ8TCT8 520 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 KLHL29Q96CT2 875 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 MARK4Q96L34 752 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 FCRL1Q96LA6 429 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 UCK2Q9BZX2 261 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 DPY30Q9C005 99 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 ENKD1Q9H0I2 346 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 SLC6A15Q9H2J7 730 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 ANKRA2Q9H9E1 313 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 GIMAP4Q9NUV9 329 aa11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 HRNRQ86YZ3 2850 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-206ENST00000491668 HCFC1P51610 2035 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 TOXO94900 526 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ABCB1P08183 1280 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 GLI4P10075 376 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 COX6B1P14854 86 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 IGFBP2P18065 325 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 DRD4P21917 467 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 TACR1P25103 407 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ACVR2AP27037 513 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ABCD3P28288 659 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 PTGER4P35408 488 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ADH7P40394 386 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 EMDP50402 254 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 NME5P56597 212 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 KRTAP10-9P60411 292 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 GSTA3Q16772 222 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ZNF628Q5EBL2 1059 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 TMEM198Q66K66 360 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 CGB2Q6NT52 195 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ZNF585AQ6P3V2 769 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 R3HCC1LQ7Z5L2 792 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 TAGAPQ8N103 731 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 LILRB4Q8NHJ6 448 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 CA5BP1Q8WTZ4 195 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 DIO2Q92813 273 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 PPCDCQ96CD2 204 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ZBTB18Q99592 522 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 PRPF18Q99633 342 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 TTYH2Q9BSA4 534 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 DOHHQ9BU89 302 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ITPAQ9BY32 194 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ANGPTL4Q9BY76 406 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 UBQLN3Q9H347 655 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ACKR4Q9NPB9 350 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ASIC5Q9NY37 505 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 SH3BP4Q9P0V3 963 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 BOKQ9UMX3 212 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 MAPRE3Q9UPY8 281 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ZNF780BQ9Y6R6 833 aa11.62□□□□□ -0.55
SEC61A1-206ENST00000491668 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 INTS1Q8N201 2190 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 MED12Q93074 2177 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 TRGV5A0A0B4J1U4 118 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 NKX2-6A6NCS4 301 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 KDM4EB2RXH2 506 aaPredicted RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 BCKDKO14874 412 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 HCN1O60741 890 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 ALDOCP09972 364 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 DDCP20711 480 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 PRPS1L1P21108 318 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 CASP3P42574 277 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 MAN2A2P49641 1150 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 PTGR1Q14914 329 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 C6orf163Q5TEZ5 329 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 HLA-DQA1Q5Y7H0 255 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 FAM71E1Q6IPT2 247 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 SEM1Q6ZVN7 128 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 LIX1LQ8IVB5 337 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 SAMD14Q8IZD0 417 aaPredicted RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 EID3Q8N140 333 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 MIER2Q8N344 545 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 OR52R1Q8NGF1 315 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 STON2Q8WXE9 905 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 RND1Q92730 232 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 HGDQ93099 445 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 EXOSC8Q96B26 276 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 JSRP1Q96MG2 331 aaPredicted RBP11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 GNRHR2Q96P88 292 aa11.61□□□□□ -0.55
SEC61A1-206ENST00000491668 BBS4Q96RK4 519 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms