RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 C7orf57Q8NEG2 295 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 TTLQ8NG68 377 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 CCT6BQ92526 530 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 POTEKPQ9BYX7 375 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 BPESC1Q9GZL8 116 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 IL22Q9GZX6 179 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 NXF5Q9H1B4 397 aaKnown RBP6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 COPS7BQ9H9Q2 264 aaPredicted RBP6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 FANCFQ9NPI8 374 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 FBXO6Q9NRD1 293 aaPredicted RBP6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 DNAJC11Q9NVH1 559 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 MED29Q9NX70 200 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 KLRF1Q9NZS2 232 aa6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 ING1Q9UK53 422 aaPredicted RBP6.28□□□□□ -1.4
PDLIM1-203ENST00000490391 LOC390937A0A1W2PQ73 354 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 WASHC1A8K0Z3 465 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 C17orf51A8MQB3 221 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 RTCAO00442 366 aaKnown RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 PRKRAO75569 313 aaKnown RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 TJP3O95049 919 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 APRTP07741 180 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 TACSTD2P09758 323 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 HIST1H2AGP0C0S8 130 aaPredicted RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 HIST1H2ADP20671 130 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 HIST1H1TP22492 207 aaPredicted RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 ATP5A1P25705 553 aaKnown RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 GALNSP34059 522 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 FDFT1P37268 417 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 KCNC1P48547 511 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 NEK2P51955 445 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 DVL1P1P54792 670 aaPredicted RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 SPOCK1Q08629 439 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 FOXL1Q12952 345 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 KLF1Q13351 362 aaPredicted RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 SLBPQ14493 270 aaKnown RBP eCLIP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 STX1AQ16623 288 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 EXOSC6Q5RKV6 272 aaKnown RBP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 SFRP5Q5T4F7 317 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF470Q6ECI4 717 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 OR5M10Q6IEU7 315 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 NEPROQ6NW34 567 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 NUP54Q7Z3B4 507 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 DENND6AQ8IWF6 608 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 RNF138Q8WVD3 245 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 KCTD4Q8WVF5 259 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 ALG3Q92685 438 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 RIT1Q92963 219 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 NXNL1Q96CM4 212 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 HIST1H2AHQ96KK5 128 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 KCNC2Q96PR1 638 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 F2RL3Q96RI0 385 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 NDNQ99608 321 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 HIST1H2AJQ99878 128 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 H2AFJQ9BTM1 129 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 ANP32EQ9BTT0 268 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 HDHD5Q9BXW7 423 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 FOLH1BQ9HBA9 442 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 FBXO34Q9NWN3 711 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 ASIC3Q9UHC3 531 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 DKKL1Q9UK85 242 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 SLC22A14Q9Y267 594 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF337Q9Y3M9 751 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 SPEF1Q9Y4P9 236 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 PTGDR2Q9Y5Y4 395 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 KCNE2Q9Y6J6 123 aa6.27□□□□□ -1.41
PDLIM1-203ENST00000490391 A0A1W2PS29 197 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PABPN1LA6NDY0 278 aaKnown RBP6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 ZNF503-AS2A6NEH8 195 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 EFCAB8A8MWE9 144 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 E7EVH7 732 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 AKR1B10O60218 316 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PRAMEF4O60810 478 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 NTN1O95631 604 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 CT62P0C5K7 136 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 C1GALT1C1LP0DN25 315 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 COL6A2P12110 1019 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 GPX3P22352 226 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 CPN2P22792 545 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 IL32P24001 234 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 MGAT1P26572 445 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 AGTR1P30556 359 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 GAS1P54826 345 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 CTBP2P56545 445 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 MAP4K2Q12851 820 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 SCGB2A2Q13296 93 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 NNATQ16517 81 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PPP1R3AQ16821 1122 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 IQCCQ4KMZ1 466 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PRAMEF9Q5VWM5 478 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 HLA-DQA1Q5Y7H0 255 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 C11orf63Q6NUN7 778 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 MFSD12Q6NUT3 480 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PAQR3Q6TCH7 311 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 TFAP2EQ6VUC0 442 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 Q6ZSR9 355 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 PRUNE1Q86TP1 453 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 GGNQ86UU5 652 aa6.26□□□□□ -1.41
PDLIM1-203ENST00000490391 STK32CQ86UX6 486 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms