RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 EDNRAP25101 427 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 MAGEA8P43361 318 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 LINC00205P59089 165 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 RPS27AP62979 156 aaKnown RBP5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 CSTF1Q05048 431 aaKnown RBP5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 ILF3Q12906 894 aaKnown RBP eCLIP5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 MTF1Q14872 753 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 TEAD2Q15562 447 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 ACCSLQ4AC99 568 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 UNC50Q53HI1 259 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 CAVIN4Q5BKX8 364 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 BTNL3Q6UXE8 466 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 HACD2Q6Y1H2 254 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 PHC2Q8IXK0 858 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 STXBP6Q8NFX7 210 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 NUDCD2Q8WVJ2 157 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 PELI1Q96FA3 418 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 RPRD1AQ96P16 312 aaPredicted RBP5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 USP28Q96RU2 1077 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 FUCA2Q9BTY2 467 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 HOXD1Q9GZZ0 328 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 ZNF71Q9NQZ8 489 aaPredicted RBP5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 NLGN3Q9NZ94 848 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 LNPEPQ9UIQ6 1025 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 ANAPC7Q9UJX3 599 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 PSME2Q9UL46 239 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 PCDHGB1Q9Y5G3 927 aa5.52□□□□□ -1.53
TM9SF3-206ENST00000490192 LRRTM2O43300 516 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 EFNA2O43921 213 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 WBP4O75554 376 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 STX11O75558 287 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 MTRF1O75570 445 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 SCGNO76038 276 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 AGTP01019 485 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 PLA2G2AP14555 144 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 CCT3P49368 545 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 IL9RQ01113 521 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 GANABQ14697 944 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 ATXN7L3Q14CW9 347 aaPredicted RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 UBE2V2Q15819 145 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 ATL3Q6DD88 541 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 DOK6Q6PKX4 331 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 GDPD4Q6W3E5 623 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 KDM7AQ6ZMT4 941 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 CCDC80Q76M96 950 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 ECHDC2Q86YB7 292 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 CLDN19Q8N6F1 224 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 OR4D5Q8NGN0 318 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 CHRDL1Q9BU40 450 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 NUP58Q9BVL2 599 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 GPR174Q9BXC1 333 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 COMMD4Q9H0A8 199 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 MTHFD2LQ9H903 347 aaPredicted RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 PCSK1NQ9UHG2 260 aa5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 EIF3LQ9Y262 564 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 MRPS18CQ9Y3D5 142 aaKnown RBP5.51□□□□□ -1.53
TM9SF3-206ENST00000490192 DOCK7Q96N67 2140 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 NPIPA5A0A0B4J1W7 369 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 SNTNA6NMZ2 147 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 LACTBL1A8MY62 500 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 NPIPA5E9PKD4 350 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 TIMM8AO60220 97 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 PABPC4LP0CB38 370 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 ERVK-10P10266 1014 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 CCDC130P13994 396 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 XRCC1P18887 633 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 RPL9P32969 192 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 RFC4P35249 363 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 SAA4P35542 130 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 HPCAL1P37235 193 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 CAPGP40121 348 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 CASP4P49662 377 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 KRTAP10-11P60412 298 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 HAND2P61296 217 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 RPS8P62241 208 aaKnown RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 DHODHQ02127 395 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 TGM3Q08188 693 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 MESDQ14696 234 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 EMC2Q15006 297 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 PPP1R7Q15435 360 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 CCDC6Q16204 474 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 TMEM44Q2T9K0 475 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 SLC35E4Q6ICL7 350 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 BHLHB9Q6PI77 547 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 ANGPTL8Q6UXH0 198 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 ZNF771Q7L3S4 317 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 NLRP9Q7RTR0 991 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 SERINC5Q86VE9 423 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 LSMEM2Q8N112 164 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 RAB42Q8N4Z0 105 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 C17orf47Q8NEP4 570 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 LMO3Q8TAP4 145 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 TADA1Q96BN2 335 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 C7orf34Q96L11 122 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 ALKBH3Q96Q83 286 aaPredicted RBP5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 ZFP14Q9HCL3 533 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 TAS2R16Q9NYV7 291 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 ADAM28Q9UKQ2 775 aa5.5□□□□□ -1.53
TM9SF3-206ENST00000490192 DHRS7Q9Y394 339 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms