RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 BANPQ8N9N5 519 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 OR2T11Q8NH01 316 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 RNF138Q8WVD3 245 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 AMDHD1Q96NU7 426 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 TRMOQ9BU70 441 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 SLC24A3Q9HC58 644 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 DDX18Q9NVP1 670 aaKnown RBP20.93■□□□□ 0.94
COL9A3-213ENST00000489045 C1orf109Q9NX04 203 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 FBXL2Q9UKC9 423 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 ITGB1BP2Q9UKP3 347 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 C19orf53Q9UNZ5 99 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-213ENST00000489045 L3MBTL1Q9Y468 752 aa20.93■□□□□ 0.94
COL9A3-213ENST00000489045 NPIPB8E9PQR5 432 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 UPK1AO00322 258 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 PLOD2O00469 737 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 DVL2O14641 736 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 RGS14O43566 566 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 TRIM13O60858 407 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 IL2RAP01589 272 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 NUDT17P0C025 328 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 ZNF136P52737 540 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 MRPS22P82650 360 aaKnown RBP20.92■□□□□ 0.94
COL9A3-213ENST00000489045 OR2L13Q8N349 312 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 GFM2Q969S9 779 aaKnown RBP20.92■□□□□ 0.94
COL9A3-213ENST00000489045 TUBB1Q9H4B7 451 aa20.92■□□□□ 0.94
COL9A3-213ENST00000489045 CD8B2A6NJW9 211 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 PSMG1O95456 288 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 NEFHP12036 1026 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 CYP4B1P13584 511 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 GRK2P25098 689 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 ALDH3A1P30838 453 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 SRD5A2P31213 254 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 GAS1P54826 345 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 SNTB1Q13884 538 aaKnown RBP20.91■□□□□ 0.94
COL9A3-213ENST00000489045 RCAN2Q14206 197 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 CES4AQ5XG92 561 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 KANK2Q63ZY3 851 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 OR5M10Q6IEU7 315 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 ANKRD26P1Q6NSI1 321 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 POMZP3Q6PJE2 187 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 ARSKQ6UWY0 536 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 RNF165Q6ZSG1 346 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 Q6ZSR9 355 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 IFNEQ86WN2 208 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 ELP4Q96EB1 424 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 FCRL1Q96LA6 429 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 FAM111AQ96PZ2 611 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 TAS2R10Q9NYW0 307 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 SLC17A7Q9P2U7 560 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 CELSR1Q9NYQ6 3014 aa20.91■□□□□ 0.94
COL9A3-213ENST00000489045 MBD3L4A6NDZ8 208 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-213ENST00000489045 MBD3L3A6NE82 208 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-213ENST00000489045 MBD3L5A6NJ08 208 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-213ENST00000489045 C17orf51A8MQB3 221 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 PDPK1O15530 556 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CHEK2O96017 543 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CHRNGP07510 517 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 LINC00032P0C843 101 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CPN1P15169 458 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 SDC1P18827 310 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 EVI2BP34910 448 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 ASCL1P50553 236 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 GFRA1P56159 465 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 IFFO1Q0D2I5 559 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CYP27C1Q4G0S4 372 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 ZNF551Q7Z340 670 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-213ENST00000489045 TMEM200AQ86VY9 491 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 TRIM42Q8IWZ5 723 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 MBD3L2Q8NHZ7 208 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-213ENST00000489045 ZPLD1Q8TCW7 415 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CCT7Q99832 543 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 SH3GL2Q99962 352 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 MECRQ9BV79 373 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CALHM2Q9HA72 323 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 ZNF629Q9UEG4 869 aaPredicted RBP20.9■□□□□ 0.94
COL9A3-213ENST00000489045 LGALS13Q9UHV8 139 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 DKKL1Q9UK85 242 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 CBLCQ9ULV8 474 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 DNAJC15Q9Y5T4 150 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 SPG11Q96JI7 2443 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 AKAP9Q99996 3911 aa20.9■□□□□ 0.94
COL9A3-213ENST00000489045 PCNX3Q9H6A9 2034 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 TMEM233B4DJY2 109 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 B4DXG7 233 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 H0Y3Z8 333 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 SCO2O43819 266 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 SPAG7O75391 227 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 UQCRC1P31930 480 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 RPL38P63173 70 aaKnown RBP20.89■□□□□ 0.93
COL9A3-213ENST00000489045 SRYQ05066 204 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 HSPB3Q12988 150 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 ENPP6Q6UWR7 440 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 DTNBP1Q96EV8 351 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 TSSK3Q96PN8 268 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 TUBA1CQ9BQE3 449 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 Q9N2J8 555 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 MED12LQ86YW9 2145 aa20.89■□□□□ 0.93
COL9A3-213ENST00000489045 F8P00451 2351 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 SYT5O00445 386 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 LSM1O15116 133 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms