RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ATAD3BQ5T9A4 648 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 PRAMEF8Q5VWM4 474 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 PRAMEF7Q5VXH5 474 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 XAF1Q6GPH4 301 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 TMEM71Q6P5X7 295 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 ZBTB44Q8NCP5 570 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 VANGL1Q8TAA9 524 aaPredicted RBP18.86■□□□□ 0.61
NECAB3-213ENST00000488489 ALOXE3Q9BYJ1 711 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 PRTFDC1Q9NRG1 225 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 C3orf18Q9UK00 162 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 MRPS33Q9Y291 106 aaKnown RBP18.86■□□□□ 0.61
NECAB3-213ENST00000488489 ADAMTS20P59510 1910 aa18.86■□□□□ 0.61
NECAB3-213ENST00000488489 A8MVJ9 347 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 HRKO00198 91 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 OR10H2O60403 315 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 SLITRK5O94991 958 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 CNR2P34972 360 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 CCL7P80098 99 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 STX4Q12846 297 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 FAHD1Q6P587 224 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 KMT5CQ86Y97 462 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 C8orf59Q8N0T1 100 aaPredicted RBP18.85■□□□□ 0.61
NECAB3-213ENST00000488489 CEP76Q8TAP6 659 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 ZNF501Q96CX3 271 aaPredicted RBP18.85■□□□□ 0.61
NECAB3-213ENST00000488489 PLEKHA8Q96JA3 519 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 SMOC1Q9H4F8 434 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 PALMDQ9NP74 551 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 FAM32AQ9Y421 112 aaKnown RBP18.85■□□□□ 0.61
NECAB3-213ENST00000488489 CFAP54Q96N23 3096 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 FER1L5A0AVI2 2057 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 ARHGAP33O14559 1287 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 MSL3P1P0C860 447 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 SP9P0CG40 484 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 CRHBPP24387 322 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 LIMS1P48059 325 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 MAP4K2Q12851 820 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 EPS8Q12929 822 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 SQSTM1Q13501 440 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 EXOC3L2Q2M3D2 409 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 TTC23Q5W5X9 447 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 SLC23A3Q6PIS1 610 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 VWA5B2Q8N398 1253 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 RAB2BQ8WUD1 216 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 HDAC2Q92769 488 aaKnown RBP18.85■□□□□ 0.61
NECAB3-213ENST00000488489 RBM18Q96H35 190 aaKnown RBP18.85■□□□□ 0.61
NECAB3-213ENST00000488489 PIGUQ9H490 435 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 GPN2Q9H9Y4 310 aaPredicted RBP18.85■□□□□ 0.61
NECAB3-213ENST00000488489 FGF21Q9NSA1 209 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 NDOR1Q9UHB4 597 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 MKLN1Q9UL63 735 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 SLC6A14Q9UN76 642 aa18.85■□□□□ 0.61
NECAB3-213ENST00000488489 M0R3H8 397 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 CLDN4O14493 209 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 PCDH17O14917 1159 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 YKT6O15498 198 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 RPLP0P05388 317 aaKnown RBP18.84■□□□□ 0.61
NECAB3-213ENST00000488489 ZNF12P17014 697 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 ZNF182P17025 639 aaPredicted RBP18.84■□□□□ 0.61
NECAB3-213ENST00000488489 MAP3K8P41279 467 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 HMGA2P52926 109 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 FOXD4Q12950 439 aaPredicted RBP18.84■□□□□ 0.61
NECAB3-213ENST00000488489 CCNJQ5T5M9 372 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 FRRS1Q6ZNA5 592 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 PIK3C3Q8NEB9 887 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 ADAMTS18Q8TE60 1221 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 PIK3R3Q92569 461 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 SPATA5L1Q9BVQ7 753 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 RLIMQ9NVW2 624 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 KCND3Q9UK17 655 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 CHST2Q9Y4C5 530 aa18.84■□□□□ 0.61
NECAB3-213ENST00000488489 BLACEA4D250 179 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 AGRPO00253 132 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 RAD23AP54725 363 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 GABARAPL2P60520 117 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 ARHGAP11BQ3KRB8 267 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 VRK2Q86Y07 508 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 GALNT12Q8IXK2 581 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 GPR135Q8IZ08 494 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 ATG16L2Q8NAA4 619 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 RCBTB1Q8NDN9 531 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 OR52R1Q8NGF1 315 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 RIT1Q92963 219 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 RNF31Q96EP0 1072 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 COX4I2Q96KJ9 171 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 SDF2Q99470 211 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 LHPPQ9H008 270 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 NECTIN3Q9NQS3 549 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 LANCL2Q9NS86 450 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 GMEB2Q9UKD1 530 aa18.83■□□□□ 0.61
NECAB3-213ENST00000488489 LGI1O95970 557 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 AGR2O95994 175 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 IFI6P09912 130 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 EPHA2P29317 976 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 HSD17B7P56937 341 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 IL1RL1Q01638 556 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 RFX4Q33E94 735 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 DEF8Q6ZN54 512 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 TSPYL5Q86VY4 417 aaPredicted RBP18.83■□□□□ 0.6
NECAB3-213ENST00000488489 SLC5A8Q8N695 610 aa18.83■□□□□ 0.6
NECAB3-213ENST00000488489 CDRT4Q8N9R6 151 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms