RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 LGSNQ5TDP6 509 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 ATRAIDQ6UW56 229 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 IL34Q6ZMJ4 242 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 TRPM8Q7Z2W7 1104 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 C9orf40Q8IXQ3 194 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 FAM9BQ8IZU0 186 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 SIDT2Q8NBJ9 832 aaKnown RBP2.25□□□□□ -2.05
CCDC66-221ENST00000487739 FBXO30Q8TB52 745 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 GLYATL1Q969I3 302 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 SNX21Q969T3 373 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 SLC35E1Q96K37 410 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 NICN1Q9BSH3 213 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 CNPY3Q9BT09 278 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 FUNDC2Q9BWH2 189 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 CCSER1Q9C0I3 900 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 TSPYL1Q9H0U9 437 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 CARD9Q9H257 536 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 GANQ9H2C0 597 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 ALG9Q9H6U8 611 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 PTGES2Q9H7Z7 377 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 DCLRE1BQ9H816 532 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 NTN4Q9HB63 628 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 EXOSC3Q9NQT5 275 aaKnown RBP2.25□□□□□ -2.05
CCDC66-221ENST00000487739 ZCCHC3Q9NUD5 404 aaKnown RBP2.25□□□□□ -2.05
CCDC66-221ENST00000487739 MAD2L2Q9UI95 211 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 MYO10Q9HD67 2058 aa2.25□□□□□ -2.05
CCDC66-221ENST00000487739 REC8O95072 547 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 ACVR1BP36896 505 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 CASP3P42574 277 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 GALK2Q01415 458 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 BCL2L1Q07817 233 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 ACTN3Q08043 901 aaPredicted RBP2.24□□□□□ -2.05
CCDC66-221ENST00000487739 PUDPQ08623 228 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 SMC1AQ14683 1233 aaKnown RBP2.24□□□□□ -2.05
CCDC66-221ENST00000487739 LASP1Q14847 261 aaKnown RBP2.24□□□□□ -2.05
CCDC66-221ENST00000487739 HFEQ30201 348 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 MEDAGQ5VYS4 303 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 CYB5R2Q6BCY4 276 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 CDC42EP5Q6NZY7 148 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 HSD17B13Q7Z5P4 300 aaPredicted RBP2.24□□□□□ -2.05
CCDC66-221ENST00000487739 SNX32Q86XE0 403 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 CNTN4Q8IWV2 1026 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF786Q8N393 782 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 TPRX1Q8N7U7 411 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF397Q8NF99 534 aaPredicted RBP2.24□□□□□ -2.05
CCDC66-221ENST00000487739 CFAP36Q96G28 342 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 CABS1Q96KC9 395 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 SPATA13Q96N96 652 aa2.24□□□□□ -2.05
CCDC66-221ENST00000487739 RAI1Q7Z5J4 1906 aaPredicted RBP2.23□□□□□ -2.05
CCDC66-221ENST00000487739 SYNJ2O15056 1496 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 CCDC69A6NI79 296 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 CCER2I3L3R5 266 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 TLR4O00206 839 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 SLC28A1O00337 649 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 VEGFDO43915 354 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 RANBP6O60518 1105 aaKnown RBP2.23□□□□□ -2.05
CCDC66-221ENST00000487739 HOXB7P09629 217 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 HTR1FP30939 366 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 PITPNBP48739 271 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 GFPT1Q06210 699 aaPredicted RBP2.23□□□□□ -2.05
CCDC66-221ENST00000487739 NPRL3Q12980 569 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 RPA4Q13156 261 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 EOGTQ5NDL2 527 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 METTL11BQ5VVY1 283 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 SULT1C3Q6IMI6 304 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 B3GLCTQ6Y288 498 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 TOM1L2Q6ZVM7 507 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF410Q86VK4 478 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 UNC45BQ8IWX7 931 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF713Q8N859 430 aaPredicted RBP2.23□□□□□ -2.05
CCDC66-221ENST00000487739 CCDC71LQ8N9Z2 235 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 DCAF4L2Q8NA75 395 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 ANKRD49Q8WVL7 239 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 LHX4Q969G2 390 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 RPGRIP1Q96KN7 1286 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 ABCG4Q9H172 646 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 GLT8D2Q9H1C3 349 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 OR51J1Q9H342 316 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 MID1IP1Q9NPA3 183 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 NDUFA13Q9P0J0 144 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 TRMT6Q9UJA5 497 aaKnown RBP2.23□□□□□ -2.05
CCDC66-221ENST00000487739 PPIAL4AQ9Y536 164 aa2.23□□□□□ -2.05
CCDC66-221ENST00000487739 A0A0U1RQG5 324 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ABCD4O14678 606 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ATP6V1G1O75348 118 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF324O75467 553 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 CXCL14O95715 111 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 AREGP15514 252 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 FERP16591 822 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 OAS2P29728 719 aaKnown RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ACADSBP45954 432 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 POU3F4P49335 361 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 IL18R1Q13478 541 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ELAVL3Q14576 367 aaKnown RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 EXOSC7Q15024 291 aaKnown RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 GPAT3Q53EU6 434 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 DCST2Q5T1A1 773 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 PRAMEF7Q5VXH5 474 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 UFSP1Q6NVU6 142 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 TSEN54Q7Z6J9 526 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms