RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 DACH2Q96NX9 599 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 QRFPRQ96P65 431 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SMR3AQ99954 134 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 AIF1LQ9BQI0 150 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 H2AFJQ9BTM1 129 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 C1orf43Q9BWL3 253 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SPNS1Q9H2V7 528 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NT5DC2Q9H857 520 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TCF7L1Q9HCS4 588 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 XAB2Q9HCS7 855 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 FBXO6Q9NRD1 293 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 PRTFDC1Q9NRG1 225 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 HOMER3Q9NSC5 361 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SACM1LQ9NTJ5 587 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ABCF3Q9NUQ8 709 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TAS2R13Q9NYV9 303 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 SPRR3Q9UBC9 169 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 MTRF1LQ9UGC7 380 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 TRMT6Q9UJA5 497 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 FBXW2Q9UKT8 454 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ACAD8Q9UKU7 415 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 MRPS33Q9Y291 106 aaKnown RBP4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ATG4BQ9Y4P1 393 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 MAD1L1Q9Y6D9 718 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 ARID1AO14497 2285 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 NBEAL1Q6ZS30 2694 aa4.66□□□□□ -1.66
R3HDM1-218ENST00000487294 RTTNQ86VV8 2226 aa4.65□□□□□ -1.66
R3HDM1-218ENST00000487294 A0A088AWK7 358 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 MBD3L4A6NDZ8 208 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 MBD3L3A6NE82 208 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 TUBAL3A6NHL2 446 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 MBD3L5A6NJ08 208 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 CD8B2A6NJW9 211 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 FAM166BA8MTA8 275 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 A8MUA0 341 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SLC16A6O15403 523 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 ARHGEF9O43307 516 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 ZNF354AO60765 605 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SCELO95171 688 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 C1QAP02745 245 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 HRGP04196 525 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 IGKV3-11P04433 115 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 P04436 131 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 CCL3P10147 92 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 ZNF10P21506 573 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 GABRB3P28472 473 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 UQCRC1P31930 480 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 HNRNPH1P31943 449 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 PTH2RP49190 550 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 HNMTP50135 292 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 HNRNPFP52597 415 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 ZNF136P52737 540 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 RAB38P57729 211 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 RAB8AP61006 207 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 DCAF7P61962 342 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 RPS7P62081 194 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 POU6F2P78424 691 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 NKX6-1P78426 367 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 IGLV3-21P80748 117 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 CRYZQ08257 329 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 BIKQ13323 160 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SNX1Q13596 522 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 DYRK1AQ13627 763 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 RUNX2Q13950 521 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SERTAD2Q14140 314 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 KEAP1Q14145 624 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 E2F2Q14209 437 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SF3B4Q15427 424 aaKnown RBP eCLIP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 PPP1R3AQ16821 1122 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 ZNF750Q32MQ0 723 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 ACSF3Q4G176 576 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 PIGGQ5H8A4 983 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SLC22A10Q63ZE4 541 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 NSUN5P2Q63ZY6 315 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 TMEM198Q66K66 360 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 CASC4Q6P4E1 433 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 IL20RBQ6UXL0 311 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 C16orf47Q6ZP98 133 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 FAM47EQ6ZV65 393 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 WDR53Q7Z5U6 358 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 KIAA1328Q86T90 577 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 FAM90A1Q86YD7 464 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 PM20D2Q8IYS1 436 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 MYO1HQ8N1T3 1032 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 OR2L5Q8NG80 312 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 MBD3L2Q8NHZ7 208 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 MAIP1Q8WWC4 291 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 KIAA1191Q96A73 305 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 PYCR2Q96C36 320 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SERPINB12Q96P63 405 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 SERINC2Q96SA4 455 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 NDNQ99608 321 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 FAM167BQ9BTA0 163 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 CNPPD1Q9BV87 410 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 TRIM54Q9BYV2 358 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 TRIM5Q9C035 493 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 UBQLN3Q9H347 655 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 EHD1Q9H4M9 534 aa4.65□□□□□ -1.67
R3HDM1-218ENST00000487294 KLHL31Q9H511 634 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms