RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TRMT12Q53H54 448 aaKnown RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 IL23RQ5VWK5 629 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 FAM219BQ5XKK7 198 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 SLC22A10Q63ZE4 541 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ZCCHC12Q6PEW1 402 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ARSKQ6UWY0 536 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 LYPD8Q6UX82 237 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 B3GNT6Q6ZMB0 384 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 GK5Q6ZS86 529 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 CAMKMTQ7Z624 323 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 SLC22A16Q86VW1 577 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 LIX1LQ8IVB5 337 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 OR2L13Q8N349 312 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 LIX1Q8N485 282 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 OR2M7Q8NG81 312 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 OR52R1Q8NGF1 315 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 OR9A2Q8NGT5 310 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 CDC26Q8NHZ8 85 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 PIWIL2Q8TC59 973 aaKnown RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 MGARPQ8TDB4 240 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 RMND5BQ96G75 393 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 EGLN2Q96KS0 407 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 C7orf26Q96N11 449 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 TSSK3Q96PN8 268 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 BTBD9Q96Q07 612 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 TTTY12Q9BZ98 90 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 CLEC4MQ9H2X3 399 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 LDAHQ9H6V9 325 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 EXO5Q9H790 373 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 SH2D2AQ9NP31 389 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 Q9UFV3 132 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 BCAP29Q9UHQ4 241 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 ACAD8Q9UKU7 415 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 C19orf53Q9UNZ5 99 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 GPR55Q9Y2T6 319 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-213ENST00000484112 L3MBTL1Q9Y468 752 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 NPFFR2Q9Y5X5 522 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 LIPGQ9Y5X9 500 aa9.17□□□□□ -0.94
CPSF4-213ENST00000484112 DCHS2Q6V1P9 2916 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 A0A0G2JMM0 328 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 A0A1W2PPB8 328 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 A0A1W2PRS3 328 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 FIGNL2A6NMB9 653 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 KIR3DP1A8MWS1 328 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 BCKDKO14874 412 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 ATP8B1O43520 1251 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 TGDSO95455 350 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 PSMG1O95456 288 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 UQCRC1P31930 480 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 SOX18P35713 384 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 MAGEA5P43359 124 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 CLNS1AP54105 237 aaKnown RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 IRX1P78414 480 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 MRPS22P82650 360 aaKnown RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 DUSP2Q05923 314 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 SNTA1Q13424 505 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 PDCD2Q16342 344 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 HYAL4Q2M3T9 481 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 LSM12Q3MHD2 195 aaKnown RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 VPS26BQ4G0F5 336 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 CPTPQ5TA50 214 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 FAM111BQ6SJ93 734 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 LARP4Q71RC2 724 aaKnown RBP eCLIP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 NUP54Q7Z3B4 507 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 SPATA19Q7Z5L4 167 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 RIMKLAQ8IXN7 391 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 FBXW8Q8N3Y1 598 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 ADCY4Q8NFM4 1077 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 CEP70Q8NHQ1 597 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 GOT1L1Q8NHS2 421 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 PSMA8Q8TAA3 256 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 LRRC8CQ8TDW0 803 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF75CPQ92670 426 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 MOAP1Q96BY2 351 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 COQ8BQ96D53 544 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 ELP4Q96EB1 424 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 DTNBP1Q96EV8 351 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 VSTM2LQ96N03 204 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 FAM173AQ9BQD7 235 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 BHLHE41Q9C0J9 482 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 GLIPR2Q9H4G4 154 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF395Q9H8N7 513 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 AKTIPQ9H8T0 292 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 C3orf14Q9HBI5 128 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 HHATLQ9HCP6 504 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 NEUROD4Q9HD90 331 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 DDX18Q9NVP1 670 aaKnown RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 SH3BP4Q9P0V3 963 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 NTMQ9P121 344 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 MRTO4Q9UKD2 239 aaKnown RBP9.16□□□□□ -0.94
CPSF4-213ENST00000484112 FAM215AQ9Y5M1 114 aa9.16□□□□□ -0.94
CPSF4-213ENST00000484112 MTORP42345 2549 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 ITPR3Q14573 2671 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 OR6C70A6NIJ9 312 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 PPM1BO75688 479 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 SNX4O95219 450 aa9.15□□□□□ -0.94
CPSF4-213ENST00000484112 JUNP05412 331 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms