RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.33■□□□□ 0.2
ATG4B-221ENST00000483778 NINJ1Q92982 152 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 TMCO6Q96DC7 493 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 RMND5BQ96G75 393 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-221ENST00000483778 MID1IP1Q9NPA3 183 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 CLCF1Q9UBD9 225 aa16.33■□□□□ 0.2
ATG4B-221ENST00000483778 MYO1GB0I1T2 1018 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 H0Y3Z8 333 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 PLOD3O60568 738 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 JUNP05412 331 aaKnown RBP16.32■□□□□ 0.2
ATG4B-221ENST00000483778 KLK2P20151 261 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 GRK2P25098 689 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 SRD5A2P31213 254 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 PKNOX1P55347 436 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 CLDN15P56746 228 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 PSG6Q00889 435 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 LCP2Q13094 533 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 SPIN4Q56A73 249 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 SPDYAQ5MJ70 313 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 IFNEQ86WN2 208 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 GSPT2Q8IYD1 628 aaKnown RBP16.32■□□□□ 0.2
ATG4B-221ENST00000483778 LRRN4CLQ8ND94 238 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 CDC26Q8NHZ8 85 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 UCN2Q96RP3 112 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 SHCBP1LQ9BZQ2 653 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 DSN1Q9H410 356 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 PLEKHF2Q9H8W4 249 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 SIRT5Q9NXA8 310 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 GALNT8Q9NY28 637 aa16.32■□□□□ 0.2
ATG4B-221ENST00000483778 FOXD3Q9UJU5 478 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-221ENST00000483778 SERTM1A2A2V5 107 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 H0YC42 278 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 BCAS2O75934 225 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-221ENST00000483778 ENO1P06733 434 aaKnown RBP16.31■□□□□ 0.2
ATG4B-221ENST00000483778 DPP4P27487 766 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 MC3RP41968 323 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 PNLIPRP2P54317 469 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 TPD52P55327 224 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-221ENST00000483778 HEPACAMQ14CZ8 416 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 POU4F3Q15319 338 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 ERCC6LQ2NKX8 1250 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 SH2D4BQ5SQS7 431 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 FAM71E1Q6IPT2 247 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 ENPP6Q6UWR7 440 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 KIF18BQ86Y91 864 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 SLC22A9Q8IVM8 553 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 FAM9CQ8IZT9 166 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 OR5M1Q8NGP8 315 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 WNT2BQ93097 391 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 LRRC46Q96FV0 321 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 EGLN2Q96KS0 407 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 BBS4Q96RK4 519 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 RHOXF2Q9BQY4 288 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 RBM24Q9BX46 236 aaKnown RBP16.31■□□□□ 0.2
ATG4B-221ENST00000483778 GSX1Q9H4S2 264 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-221ENST00000483778 PTGDR2Q9Y5Y4 395 aa16.31■□□□□ 0.2
ATG4B-221ENST00000483778 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 SCO2O43819 266 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 FADS1O60427 444 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 TNFSF13O75888 250 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 PROCP04070 461 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 SHBGP04278 402 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 ZNF708P17019 499 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 DDCP20711 480 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 DNASE1P24855 282 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 IL12BP29460 328 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 MPIP34949 423 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 PEX19P40855 299 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 FOXD4Q12950 439 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-221ENST00000483778 GAB1Q13480 694 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 EFR3AQ14156 821 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 TMEM107Q6UX40 140 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 ZYG11AQ6WRX3 759 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 LCA5Q86VQ0 697 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 OR2M3Q8NG83 312 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 ACMSDQ8TDX5 336 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 ERP27Q96DN0 273 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 SFXN2Q96NB2 322 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 TM9SF2Q99805 663 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 GLIPR2Q9H4G4 154 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 MED11Q9P086 117 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 MRPS18CQ9Y3D5 142 aaKnown RBP16.3■□□□□ 0.2
ATG4B-221ENST00000483778 CCL27Q9Y4X3 112 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 POLR3HQ9Y535 204 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-221ENST00000483778 ARID1AO14497 2285 aa16.3■□□□□ 0.2
ATG4B-221ENST00000483778 UPK1AO00322 258 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 ABCB7O75027 752 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 ATE1O95260 518 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 GSTA1P08263 222 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 CHMP24386 653 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 NCBP2P52298 156 aaKnown RBP eCLIP16.29■□□□□ 0.22e-8■■■■■ 28.7
ATG4B-221ENST00000483778 SUCLG1P53597 346 aaKnown RBP16.29■□□□□ 0.2
ATG4B-221ENST00000483778 ADAM8P78325 824 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 IFT20Q8IY31 132 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 FADS6Q8N9I5 356 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 GIMAP4Q9NUV9 329 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 TAS2R9Q9NYW1 312 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 TAS2R7Q9NYW3 318 aa16.29■□□□□ 0.2
ATG4B-221ENST00000483778 PSMC3IPQ9P2W1 217 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-221ENST00000483778 DCDC2Q9UHG0 476 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms