RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 CDK9P50750 372 aaKnown RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 OCRLQ01968 901 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 VPS26BQ4G0F5 336 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 BICRALQ6AI39 1079 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 TIGD3Q6B0B8 471 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 LARP4Q71RC2 724 aaKnown RBP eCLIP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 MAMDC2Q7Z304 686 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 ZNF808Q8N4W9 903 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 CDRT4Q8N9R6 151 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 OR7A2PQ8NGA2 310 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 OR5P2Q8WZ92 322 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 DTNBP1Q96EV8 351 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 ATP6V1G3Q96LB4 118 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 JSRP1Q96MG2 331 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 MS4A4EQ96PG1 132 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 DMRTA2Q96SC8 542 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 ADOQ96SZ5 270 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 SH3GL2Q99962 352 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 NUF2Q9BZD4 464 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 BHLHE41Q9C0J9 482 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 TP63Q9H3D4 680 aaPredicted RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 MANSC1Q9H8J5 431 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 NEUROD4Q9HD90 331 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 PNPOQ9NVS9 261 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 MRTO4Q9UKD2 239 aaKnown RBP13.83□□□□□ -0.2
COL16A1-213ENST00000482910 C15orf41Q9Y2V0 281 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 PCDHGB3Q9Y5G1 929 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 LIPGQ9Y5X9 500 aa13.83□□□□□ -0.2
COL16A1-213ENST00000482910 PHF3Q92576 2039 aaKnown RBP13.82□□□□□ -0.2
COL16A1-213ENST00000482910 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 A0A1W2PRB8 838 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 TRPC5OSA6NMA1 111 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 ADAM10O14672 748 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 SNPHO15079 494 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 HDAC3O15379 428 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 ICOSLGO75144 302 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 NME6O75414 186 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-213ENST00000482910 HPNP05981 417 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 TPOP07202 933 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 CELA3AP09093 270 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 LBPP18428 481 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 GDF1P27539 372 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 MAN2A2P49641 1150 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 PSMD4P55036 377 aaKnown RBP13.82□□□□□ -0.2
COL16A1-213ENST00000482910 PRR5P85299 388 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 DECR1Q16698 335 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 LSM12Q3MHD2 195 aaKnown RBP13.82□□□□□ -0.2
COL16A1-213ENST00000482910 XKRXQ6PP77 449 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 CD163Q86VB7 1156 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 NUP43Q8NFH3 380 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 OR1J4Q8NGS1 313 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 ITLN2Q8WWU7 325 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-213ENST00000482910 SARAFQ96BY9 339 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 GIMAP5Q96F15 307 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 LDAHQ9H6V9 325 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 SIRT3Q9NTG7 399 aaPredicted RBP13.82□□□□□ -0.2
COL16A1-213ENST00000482910 KLRF1Q9NZS2 232 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 SH3BGRL2Q9UJC5 107 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 CBLCQ9ULV8 474 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 ABCG2Q9UNQ0 655 aa13.82□□□□□ -0.2
COL16A1-213ENST00000482910 SDHDO14521 159 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 SOX30O94993 753 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 NKX2-2O95096 273 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 IL33O95760 270 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 CLDN1O95832 211 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 PTPN6P29350 595 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 SMSP52788 366 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 DIO3P55073 304 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 ADORA2A-AS1P86434 159 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 GAB1Q13480 694 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 ART3Q13508 389 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 EXOSC6Q5RKV6 272 aaKnown RBP13.81□□□□□ -0.2
COL16A1-213ENST00000482910 DESI1Q6ICB0 168 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 TMEM211Q6ICI0 200 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 MFSD12Q6NUT3 480 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 KRTCAP2Q8N6L1 136 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 OR4N2Q8NGD1 307 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 OR8J2Q8NGG1 315 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 MOAP1Q96BY2 351 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 PPP1R36Q96LQ0 422 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 GNRHR2Q96P88 292 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 DUSP26Q9BV47 211 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 GIN1Q9NXP7 522 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 WIF1Q9Y5W5 379 aa13.81□□□□□ -0.2
COL16A1-213ENST00000482910 FIGNL2A6NMB9 653 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 HMGB1P1B2RPK0 211 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-213ENST00000482910 NPIPA2E9PIF3 369 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 NPIPA3F8WFD2 350 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 ZNHIT1O43257 154 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 CBR3O75828 277 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 KCNH1O95259 989 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 HOXD4P09016 255 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-213ENST00000482910 ENDOUP21128 410 aaKnown RBP13.8□□□□□ -0.2
COL16A1-213ENST00000482910 GABRA3P34903 492 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 PRIM2P49643 509 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 DPY19L1Q2PZI1 675 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 GXYLT1Q4G148 440 aa13.8□□□□□ -0.2
COL16A1-213ENST00000482910 TTMPQ5BVD1 217 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms