RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 FCMRO60667 390 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 SLITRK5O94991 958 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ENDOUP21128 410 aaKnown RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 MMP11P24347 488 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 MYL9P24844 172 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ABATP80404 500 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 CD83Q01151 205 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ZNF45Q02386 682 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 NDUFA9Q16795 377 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ZFP69Q49AA0 526 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 TMEM52BQ4KMG9 183 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 HLA-DQA1Q5Y7H0 255 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 LAIR1Q6GTX8 287 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 MZT2AQ6P582 158 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ADAMTSL4Q6UY14 1074 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 VASH1Q7L8A9 365 aaPredicted RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 ADGRF3Q8IZF5 1079 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 UXS1Q8NBZ7 420 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 GNPDA2Q8TDQ7 276 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 SNX33Q8WV41 574 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 C11orf24Q96F05 449 aaPredicted RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 C19orf43Q9BQ61 176 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PBX4Q9BYU1 374 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 HCN3Q9P1Z3 774 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PHF11Q9UIL8 331 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 SLC7A7Q9UM01 511 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 MRPS33Q9Y291 106 aaKnown RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 CLCA3PQ9Y6N3 262 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PIAS3Q9Y6X2 628 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 CHD5Q8TDI0 1954 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 A0A1W2PQL4 384 aaPredicted RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 A0A1W2PS29 197 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PRSS38A1L453 326 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 NPC1O15118 1278 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 DYRK3O43781 588 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 UPK1BO75841 260 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 SOX30O94993 753 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 GYPBP06028 91 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 JUNDP17535 347 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ACVR1BP36896 505 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
CALD1-220ENST00000482470 REEP5Q00765 189 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 DPTQ07507 201 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PUM1Q14671 1186 aaKnown RBP eCLIP8.6□□□□□ -1.03
CALD1-220ENST00000482470 LRIT3Q3SXY7 679 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 STEAP3Q658P3 488 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 CCDC71Q8IV32 467 aaPredicted RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 GJD3Q8N144 294 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 LINC01555Q8NAE3 123 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ZG16BQ96DA0 208 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 SLC38A3Q99624 504 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ALOXE3Q9BYJ1 711 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ZSCAN32Q9NX65 697 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 YARS2Q9Y2Z4 477 aaKnown RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 A0A0G2JPF8 293 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 HNRNPCL3B7ZW38 293 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 HMGN1P05114 100 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 CLEC2LP0C7M8 214 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 HNRNPCL4P0DMR1 293 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PCMT1P22061 227 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ERV3-1Q14264 604 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 FLYWCH1Q4VC44 716 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ACSM5Q6NUN0 579 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ABHD17CQ6PCB6 329 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 RTL4Q6ZR62 310 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 OR2T33Q8NG76 320 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 OR2A1Q8NGT9 310 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ZNF563Q8TA94 476 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 NEIL3Q8TAT5 605 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 TANKQ92844 425 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 FGF14Q92915 247 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 TMCO6Q96DC7 493 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 SLC41A3Q96GZ6 507 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 WACQ9BTA9 647 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 TPSD1Q9BZJ3 242 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 MED20Q9H944 212 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 ZFR2Q9UPR6 939 aaKnown RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 EXO1Q9UQ84 846 aaKnown RBP8.6□□□□□ -1.03
CALD1-220ENST00000482470 KCNE3Q9Y6H6 103 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 PMF1-BGLAPU3KQ54 211 aa8.6□□□□□ -1.03
CALD1-220ENST00000482470 FAM186AA6NE01 2351 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 PRR23D1E9PI22 279 aaPredicted RBP8.59□□□□□ -1.03
CALD1-220ENST00000482470 SGK494L7N484 410 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 CHST10O43529 356 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 AKAP8O43823 692 aaKnown RBP8.59□□□□□ -1.03
CALD1-220ENST00000482470 PRR23D2P0DMB1 279 aaPredicted RBP8.59□□□□□ -1.03
CALD1-220ENST00000482470 SLC2A2P11168 524 aaPredicted RBP8.59□□□□□ -1.03
CALD1-220ENST00000482470 TNFSF8P32971 234 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 ACSL1P33121 698 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 BMP8BP34820 402 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 EPHA5P54756 1037 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 BIKQ13323 160 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 SF3B4Q15427 424 aaKnown RBP eCLIP8.59□□□□□ -1.03
CALD1-220ENST00000482470 FXNQ16595 210 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 MZT2BQ6NZ67 158 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 PGBD2Q6P3X8 592 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 TUBA3EQ6PEY2 450 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 BMP8AQ7Z5Y6 402 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 ZER1Q7Z7L7 766 aa8.59□□□□□ -1.03
CALD1-220ENST00000482470 SAMD14Q8IZD0 417 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms