RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 LACC1Q8IV20 430 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 DDIASQ8IXT1 998 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 ZZZ3Q8IYH5 903 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 PM20D2Q8IYS1 436 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 CLYBLQ8N0X4 340 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.53□□□□□ -0.88
CPSF4-212ENST00000482251 NRGNQ92686 78 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 NTNG2Q96CW9 530 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 ERP27Q96DN0 273 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 SLC35A4Q96G79 324 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 WDYHV1Q96HA8 205 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 AMDHD1Q96NU7 426 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 TUBB1Q9H4B7 451 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 C1orf109Q9NX04 203 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 SIRT5Q9NXA8 310 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 TAS2R9Q9NYW1 312 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 GIMAP2Q9UG22 337 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 CCL27Q9Y4X3 112 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 OTOGQ6ZRI0 2925 aa9.53□□□□□ -0.88
CPSF4-212ENST00000482251 HSPB2A8KAH6 182 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 AHRRA9YTQ3 701 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 EEF1E1-BLOC1S5C9J1V9 151 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 FAM47E-STBD1D6RA91 191 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 H3BQF6 201 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 SLC28A1O00337 649 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 DVL2O14641 736 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 PIP5K1BO14986 540 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 PDPK1O15530 556 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 EEF1E1O43324 174 aaKnown RBP9.52□□□□□ -0.89
CPSF4-212ENST00000482251 RGS14O43566 566 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 TRIM13O60858 407 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 ABCB7O75027 752 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 CHEK2O96017 543 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 SDC1P18827 310 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 EVI2BP34910 448 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 GPC1P35052 558 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 GCKP35557 465 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 STARP49675 285 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 NAA20P61599 178 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 SNTA1Q13424 505 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 EFR3AQ14156 821 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 KIAA0040Q15053 153 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 HSPB2Q16082 182 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 NSUN5P2Q63ZY6 315 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 IKBIPQ70UQ0 350 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 PLCZ1Q86YW0 608 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 CNPY4Q8N129 248 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 BANPQ8N9N5 519 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 C9orf106Q8NAJ2 232 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 OR4K17Q8NGC6 315 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 FAM76AQ8TAV0 307 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 TWIST2Q8WVJ9 160 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 OTUB1Q96FW1 271 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-212ENST00000482251 SFXN2Q96NB2 322 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 TEP1Q99973 2627 aaKnown RBP9.52□□□□□ -0.89
CPSF4-212ENST00000482251 TUBA1CQ9BQE3 449 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 OR2B2Q9GZK3 357 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-212ENST00000482251 MKS1Q9NXB0 559 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 TAS2R10Q9NYW0 307 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 PPP4R1LQ9P1A2 415 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 BAIAP2L1Q9UHR4 511 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 C19orf53Q9UNZ5 99 aaPredicted RBP9.52□□□□□ -0.89
CPSF4-212ENST00000482251 L3MBTL1Q9Y468 752 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 PCDHGB3Q9Y5G1 929 aa9.52□□□□□ -0.89
CPSF4-212ENST00000482251 AKAP9Q99996 3911 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 A0A087WV62 115 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 GXYLT2A0PJZ3 443 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 LSM1O15116 133 aaKnown RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 SKAP2O75563 359 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 CBR3O75828 277 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ZWINTO95229 277 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 EPPINO95925 133 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ACTL6AO96019 429 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 IL2RAP01589 272 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 NUDT17P0C025 328 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 NEFHP12036 1026 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 CREB1P16220 341 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ASCL1P50553 236 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 DGKQP52824 942 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 PRKAG1P54619 331 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 GAS1P54826 345 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 RCAN2Q14206 197 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ZNHIT3Q15649 155 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 RFTN2Q52LD8 501 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ARL13AQ5H913 290 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 NHSL2Q5HYW2 709 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 RAET1LQ5VY80 246 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ARSKQ6UWY0 536 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 Q6ZSR9 355 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 TRIM42Q8IWZ5 723 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 UBQLNLQ8IYU4 475 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 GCNT2Q8N0V5 402 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 OR2L13Q8N349 312 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 RIBC1Q8N443 379 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 OR5M1Q8NGP8 315 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 TCP10LQ8TDR4 215 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 AENQ8WTP8 325 aaKnown RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 PIK3R3Q92569 461 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms