RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 GPN3Q9UHW5 284 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-217ENST00000475693 AP3M1Q9Y2T2 418 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 CDC14CA4D256 554 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 C7orf72A4D263 438 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 TIPRLO75663 272 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 SEC24DO94855 1032 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-217ENST00000475693 STAMBPO95630 424 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 TCN2P20062 427 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 F8A1P23610 371 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 GABRA3P34903 492 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 PCGF2P35227 344 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 RANBP1P43487 201 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 KHKP50053 298 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 PSG6Q00889 435 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 FUT7Q11130 342 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 MYBPC3Q14896 1274 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 GPAT3Q53EU6 434 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 FIGNL1Q6PIW4 674 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 C6orf15Q6UXA7 325 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-217ENST00000475693 C16orf47Q6ZP98 133 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-217ENST00000475693 PACRGLQ8N7B6 248 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 GOLM1Q8NBJ4 401 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 GPR151Q8TDV0 419 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 MOAP1Q96BY2 351 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 RAD21L1Q9H4I0 556 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 FOLH1BQ9HBA9 442 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 DCAF13Q9NV06 445 aaKnown RBP16.8■□□□□ 0.28
ATG4B-217ENST00000475693 TUBA8Q9NY65 449 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-217ENST00000475693 PADI1Q9ULC6 663 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 MYRFQ9Y2G1 1151 aa16.8■□□□□ 0.28
ATG4B-217ENST00000475693 NPIPA5A0A0B4J1W7 369 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 DHRS12A0PJE2 317 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 A8MVJ9 347 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 NPIPA7E9PJI5 369 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 H3BNH8 94 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 ZNF701M0R085 212 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-217ENST00000475693 DLGAP3O95886 979 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 NPIPA8P0DM63 369 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 GABREP78334 506 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 CHRNEQ04844 493 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 NCF4Q15080 339 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 CDC73Q6P1J9 531 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 ZAR1Q86SH2 424 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 ZNF721Q8TF20 911 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 CT55Q8WUE5 264 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 RNF145Q96MT1 663 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 LRFN5Q96NI6 719 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 TREX2Q9BQ50 279 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-217ENST00000475693 DDA1Q9BW61 102 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 ITPAQ9BY32 194 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 SEMA6AQ9H2E6 1030 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 COQ10BQ9H8M1 238 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 MKLN1Q9UL63 735 aa16.79■□□□□ 0.28
ATG4B-217ENST00000475693 HEMK1Q9Y5R4 338 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-217ENST00000475693 TRIM64CA6NLI5 447 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 SLC37A1P57057 533 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 RSPO4Q2I0M5 234 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 REEP3Q6NUK4 255 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 ERICH5Q6P6B1 374 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 DHRS4L2Q6PKH6 230 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 NPSR1Q6W5P4 371 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 TNIP2Q8NFZ5 429 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 WFDC6Q9BQY6 131 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 SLC26A1Q9H2B4 701 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 A4GALTQ9NPC4 353 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 ARMC1Q9NVT9 282 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 MRPS18BQ9Y676 258 aaKnown RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 PTPRBP23467 1997 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 SPTBN4Q9H254 2564 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 CENPVL1A0A0U1RR11 272 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 AQP12BA6NM10 295 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 C5orf58C9J3I9 102 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 VEZF1Q14119 521 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 ELAVL1Q15717 326 aaKnown RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 ZNF630Q2M218 657 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 PPP4R4Q6NUP7 873 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 AMIGO2Q86SJ2 522 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 AQP12AQ8IXF9 295 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 LGI4Q8N135 537 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 MIPOL1Q8TD10 442 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 THAP3Q8WTV1 239 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 ITFG2Q969R8 447 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 VSTM2LQ96N03 204 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 WDR77Q9BQA1 342 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 C14orf105Q9NVL8 296 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 CDV3Q9UKY7 258 aaKnown RBP16.78■□□□□ 0.28
ATG4B-217ENST00000475693 NINQ8N4C6 2090 aa16.78■□□□□ 0.28
ATG4B-217ENST00000475693 SLC30A4O14863 429 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 HNRNPRO43390 633 aaKnown RBP16.77■□□□□ 0.28
ATG4B-217ENST00000475693 ALBP02768 609 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 OR1E2P47887 323 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 FOXD4Q12950 439 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-217ENST00000475693 TGIF1Q15583 401 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 DUSP7Q16829 419 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 KCTD21Q4G0X4 260 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 CYBRD1Q53TN4 286 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 DESI1Q6ICB0 168 aa16.77■□□□□ 0.28
ATG4B-217ENST00000475693 COMTD1Q86VU5 262 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms