RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 FPR1P21462 350 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 DNAJA1P31689 397 aaKnown RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 TRHRP34981 398 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 ARHGDIAP52565 204 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 EFNA3P52797 238 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 IST1P53990 364 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 RAB15P59190 212 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 INSM1Q01101 510 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF311Q5JNZ3 666 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 OTUD3Q5T2D3 398 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 TYW3Q6IPR3 259 aaKnown RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 DHRS4L2Q6PKH6 230 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 TSEN54Q7Z6J9 526 aaKnown RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 CYP4Z1Q86W10 505 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 OR52P1PQ8NH57 321 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 C16orf52Q8NHV5 167 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 SLC2A12Q8TD20 617 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 DAZLQ92904 295 aaKnown RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 RMND5BQ96G75 393 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 LRFN5Q96NI6 719 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF570Q96NI8 536 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 EPYCQ99645 322 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 PIP5K1AQ99755 562 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 OSBPL11Q9BXB4 747 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 AMBRA1Q9C0C7 1298 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 SLC26A1Q9H2B4 701 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 Q9N2J8 555 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 GPN3Q9UHW5 284 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF443Q9Y2A4 671 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 IFT52Q9Y366 437 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 FAM32AQ9Y421 112 aaKnown RBP12.76□□□□□ -0.37
TRAF4-210ENST00000475329 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
TRAF4-210ENST00000475329 C7orf72A4D263 438 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 VSTM2BA6NLU5 285 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 IDSB3KWA1 339 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 GDF9O60383 454 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 FCMRO60667 390 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 DDAH2O95865 285 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ALBP02768 609 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 KLK3P07288 261 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 THBS1P07996 1170 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 GUSBP08236 651 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF28P17035 718 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 RHCEP18577 417 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 RPS4Y1P22090 263 aaKnown RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 PRKAR1BP31321 381 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 RRM2P31350 389 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 NBL1P41271 181 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ALDH3A2P51648 485 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 PSG6Q00889 435 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 SPIBQ01892 262 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 PUM1Q14671 1186 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 LARS2Q15031 903 aaKnown RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ISXQ2M1V0 245 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 EIPR1Q53HC9 387 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 CCNJQ5T5M9 372 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 FIGNL1Q6PIW4 674 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 TBPL2Q6SJ96 375 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 SHISA6Q6ZSJ9 500 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 TMEM179BQ7Z7N9 219 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 VANGL1Q8TAA9 524 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 MAGEE2Q8TD90 523 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 PMM1Q92871 262 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 LIN37Q96GY3 246 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 SENP5Q96HI0 755 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 DEPDC7Q96QD5 511 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 RBM4BQ9BQ04 359 aaKnown RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 RBM4Q9BWF3 364 aaKnown RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 OSBPL10Q9BXB5 764 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ITPAQ9BY32 194 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ULBP3Q9BZM4 244 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 OR8D2Q9GZM6 311 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 SAP130Q9H0E3 1048 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 QRSL1Q9H0R6 528 aaKnown RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 GABARAPL1Q9H0R8 117 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 SOX17Q9H6I2 414 aaPredicted RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 FAM86C1Q9NVL1 165 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 USE1Q9NZ43 259 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 NXT1Q9UKK6 140 aaKnown RBP12.75□□□□□ -0.37
TRAF4-210ENST00000475329 MKLN1Q9UL63 735 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF232Q9UNY5 417 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 DTX4Q9Y2E6 619 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 TESMINQ9Y4I5 508 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 U3KQV3 271 aa12.75□□□□□ -0.37
TRAF4-210ENST00000475329 EXPH5Q8NEV8 1989 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 C9J4A7 227 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 BRINP1O60477 761 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 ALOX12BO75342 701 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 CSO75390 466 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms