RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C10orf82Q8WW14 230 aa18.45■□□□□ 0.54
APP-215ENST00000474136 PPWD1Q96BP3 646 aaKnown RBP18.45■□□□□ 0.54
APP-215ENST00000474136 TUBGCP3Q96CW5 907 aa18.45■□□□□ 0.54
APP-215ENST00000474136 THOC1Q96FV9 657 aaKnown RBP18.45■□□□□ 0.54
APP-215ENST00000474136 CMTM7Q96FZ5 175 aa18.45■□□□□ 0.54
APP-215ENST00000474136 TRIB1Q96RU8 372 aa18.45■□□□□ 0.54
APP-215ENST00000474136 SERPINI1Q99574 410 aa18.45■□□□□ 0.54
APP-215ENST00000474136 DOHHQ9BU89 302 aa18.45■□□□□ 0.54
APP-215ENST00000474136 PRDM14Q9GZV8 571 aa18.45■□□□□ 0.54
APP-215ENST00000474136 TUBB1Q9H4B7 451 aa18.45■□□□□ 0.54
APP-215ENST00000474136 CNIH4Q9P003 139 aa18.45■□□□□ 0.54
APP-215ENST00000474136 CAMK2AQ9UQM7 478 aa18.45■□□□□ 0.54
APP-215ENST00000474136 SLC6A5Q9Y345 797 aa18.45■□□□□ 0.54
APP-215ENST00000474136 STAB1Q9NY15 2570 aa18.44■□□□□ 0.54
APP-215ENST00000474136 ARID1AO14497 2285 aa18.44■□□□□ 0.54
APP-215ENST00000474136 SDHDO14521 159 aa18.44■□□□□ 0.54
APP-215ENST00000474136 TRAPPC6AO75865 159 aa18.44■□□□□ 0.54
APP-215ENST00000474136 RSL1D1O76021 490 aaKnown RBP18.44■□□□□ 0.54
APP-215ENST00000474136 GOSR1O95249 250 aa18.44■□□□□ 0.54
APP-215ENST00000474136 IGKV3-11P04433 115 aa18.44■□□□□ 0.54
APP-215ENST00000474136 PRPH2P23942 346 aa18.44■□□□□ 0.54
APP-215ENST00000474136 ARFIP1P53367 373 aa18.44■□□□□ 0.54
APP-215ENST00000474136 CUL3Q13618 768 aa18.44■□□□□ 0.54
APP-215ENST00000474136 ATP6AP1LQ52LC2 224 aa18.44■□□□□ 0.54
APP-215ENST00000474136 UBE3DQ7Z6J8 389 aa18.44■□□□□ 0.54
APP-215ENST00000474136 RABEP2Q9H5N1 569 aa18.44■□□□□ 0.54
APP-215ENST00000474136 AHSPQ9NZD4 102 aa18.44■□□□□ 0.54
APP-215ENST00000474136 VPS29Q9UBQ0 182 aa18.44■□□□□ 0.54
APP-215ENST00000474136 ZANQ9Y493 2812 aa18.44■□□□□ 0.54
APP-215ENST00000474136 FREM3P0C091 2139 aa18.43■□□□□ 0.54
APP-215ENST00000474136 GOLGA8QA0A0J9YX86 632 aa18.43■□□□□ 0.54
APP-215ENST00000474136 GOLGA8OA6NCC3 632 aa18.43■□□□□ 0.54
APP-215ENST00000474136 MBD3L4A6NDZ8 208 aaPredicted RBP18.43■□□□□ 0.54
APP-215ENST00000474136 MBD3L3A6NE82 208 aaPredicted RBP18.43■□□□□ 0.54
APP-215ENST00000474136 MBD3L5A6NJ08 208 aaPredicted RBP18.43■□□□□ 0.54
APP-215ENST00000474136 GOLGA8NF8WBI6 632 aa18.43■□□□□ 0.54
APP-215ENST00000474136 RTCAO00442 366 aaKnown RBP18.43■□□□□ 0.54
APP-215ENST00000474136 FGF17O60258 216 aa18.43■□□□□ 0.54
APP-215ENST00000474136 TRIM3O75382 744 aaPredicted RBP18.43■□□□□ 0.54
APP-215ENST00000474136 DCTN3O75935 186 aa18.43■□□□□ 0.54
APP-215ENST00000474136 FBXO45P0C2W1 286 aa18.43■□□□□ 0.54
APP-215ENST00000474136 LBPP18428 481 aa18.43■□□□□ 0.54
APP-215ENST00000474136 NEK2P51955 445 aa18.43■□□□□ 0.54
APP-215ENST00000474136 TBL3Q12788 808 aaKnown RBP18.43■□□□□ 0.54
APP-215ENST00000474136 SLC9B1Q4ZJI4 515 aa18.43■□□□□ 0.54
APP-215ENST00000474136 TMEM35AQ53FP2 167 aa18.43■□□□□ 0.54
APP-215ENST00000474136 TCHHL1Q5QJ38 904 aaPredicted RBP18.43■□□□□ 0.54
APP-215ENST00000474136 DCST1Q5T197 706 aa18.43■□□□□ 0.54
APP-215ENST00000474136 BICRALQ6AI39 1079 aa18.43■□□□□ 0.54
APP-215ENST00000474136 NXNQ6DKJ4 435 aa18.43■□□□□ 0.54
APP-215ENST00000474136 OGFOD2Q6N063 350 aa18.43■□□□□ 0.54
APP-215ENST00000474136 MAVSQ7Z434 540 aa18.43■□□□□ 0.54
APP-215ENST00000474136 SPATA19Q7Z5L4 167 aa18.43■□□□□ 0.54
APP-215ENST00000474136 C9orf106Q8NAJ2 232 aa18.43■□□□□ 0.54
APP-215ENST00000474136 SRFBP1Q8NEF9 429 aaKnown RBP18.43■□□□□ 0.54
APP-215ENST00000474136 MBD3L2Q8NHZ7 208 aaPredicted RBP18.43■□□□□ 0.54
APP-215ENST00000474136 DACH2Q96NX9 599 aa18.43■□□□□ 0.54
APP-215ENST00000474136 GAL3ST4Q96RP7 486 aa18.43■□□□□ 0.54
APP-215ENST00000474136 MTERF1Q99551 399 aaKnown RBP18.43■□□□□ 0.54
APP-215ENST00000474136 RBM24Q9BX46 236 aaKnown RBP18.43■□□□□ 0.54
APP-215ENST00000474136 LYRM4Q9HD34 91 aa18.43■□□□□ 0.54
APP-215ENST00000474136 FARSBQ9NSD9 589 aaKnown RBP18.43■□□□□ 0.54
APP-215ENST00000474136 TMED5Q9Y3A6 229 aa18.43■□□□□ 0.54
APP-215ENST00000474136 SH3D21A4FU49 640 aa18.42■□□□□ 0.54
APP-215ENST00000474136 TRIM64A6NGJ6 449 aa18.42■□□□□ 0.54
APP-215ENST00000474136 TRIM64BA6NI03 449 aa18.42■□□□□ 0.54
APP-215ENST00000474136 CD8B2A6NJW9 211 aa18.42■□□□□ 0.54
APP-215ENST00000474136 CCDC22O60826 627 aa18.42■□□□□ 0.54
APP-215ENST00000474136 SMPD2O60906 423 aa18.42■□□□□ 0.54
APP-215ENST00000474136 COX7A2P14406 83 aa18.42■□□□□ 0.54
APP-215ENST00000474136 EPHA3P29320 983 aa18.42■□□□□ 0.54
APP-215ENST00000474136 OPRM1P35372 400 aa18.42■□□□□ 0.54
APP-215ENST00000474136 STT3AP46977 705 aa18.42■□□□□ 0.54
APP-215ENST00000474136 HTR6P50406 440 aa18.42■□□□□ 0.54
APP-215ENST00000474136 TGM3Q08188 693 aa18.42■□□□□ 0.54
APP-215ENST00000474136 FOXF2Q12947 444 aa18.42■□□□□ 0.54
APP-215ENST00000474136 DDX39BQ13838 428 aaKnown RBP18.42■□□□□ 0.54
APP-215ENST00000474136 VASNQ6EMK4 673 aa18.42■□□□□ 0.54
APP-215ENST00000474136 TMEM64Q6YI46 380 aa18.42■□□□□ 0.54
APP-215ENST00000474136 Q6ZSR9 355 aa18.42■□□□□ 0.54
APP-215ENST00000474136 LARP4Q71RC2 724 aaKnown RBP eCLIP18.42■□□□□ 0.54
APP-215ENST00000474136 PM20D2Q8IYS1 436 aa18.42■□□□□ 0.54
APP-215ENST00000474136 FAM9CQ8IZT9 166 aa18.42■□□□□ 0.54
APP-215ENST00000474136 SLC15A4Q8N697 577 aa18.42■□□□□ 0.54
APP-215ENST00000474136 WDYHV1Q96HA8 205 aa18.42■□□□□ 0.54
APP-215ENST00000474136 ZNF597Q96LX8 424 aa18.42■□□□□ 0.54
APP-215ENST00000474136 DGAT2Q96PD7 388 aa18.42■□□□□ 0.54
APP-215ENST00000474136 WDR55Q9H6Y2 383 aaPredicted RBP18.42■□□□□ 0.54
APP-215ENST00000474136 AKTIPQ9H8T0 292 aa18.42■□□□□ 0.54
APP-215ENST00000474136 C1orf109Q9NX04 203 aa18.42■□□□□ 0.54
APP-215ENST00000474136 GALNT8Q9NY28 637 aa18.42■□□□□ 0.54
APP-215ENST00000474136 SLC12A4Q9UP95 1085 aa18.42■□□□□ 0.54
APP-215ENST00000474136 CCL27Q9Y4X3 112 aa18.42■□□□□ 0.54
APP-215ENST00000474136 SEMA3DO95025 777 aa18.41■□□□□ 0.54
APP-215ENST00000474136 JUNP05412 331 aaKnown RBP18.41■□□□□ 0.54
APP-215ENST00000474136 BMP7P18075 431 aa18.41■□□□□ 0.54
APP-215ENST00000474136 ATP5A1P25705 553 aaKnown RBP18.41■□□□□ 0.54
APP-215ENST00000474136 MAPK1P28482 360 aa18.41■□□□□ 0.54
APP-215ENST00000474136 LSM12Q3MHD2 195 aaKnown RBP18.41■□□□□ 0.54
APP-215ENST00000474136 SPIN4Q56A73 249 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms