RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 FAM120BQ96EK7 910 aaKnown RBP17.32■□□□□ 0.36
PTCD3-210ENST00000473829 CCDC120Q96HB5 630 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 TMEM41AQ96HV5 264 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 MS4A4EQ96PG1 132 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 PHF12Q96QT6 1004 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 SLC6A15Q9H2J7 730 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 UBQLN3Q9H347 655 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 FLRT3Q9NZU0 649 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 TNFRSF10DQ9UBN6 386 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 A0A1B0GVC2 190 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 GXYLT2A0PJZ3 443 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 C17orf51A8MQB3 221 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 HMGB1P1B2RPK0 211 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-210ENST00000473829 ADAM10O14672 748 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 EMC8O43402 210 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 ICOSLGO75144 302 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 CLDN1O95832 211 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 TPOP07202 933 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 ACP2P11117 423 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 CYP4B1P13584 511 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 DDX5P17844 614 aaKnown RBP17.31■□□□□ 0.36
PTCD3-210ENST00000473829 GDF1P27539 372 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 IL12BP29460 328 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 MASP1P48740 699 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 CASP6P55212 293 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 PER3P56645 1201 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 PSPHP78330 225 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 EMC4Q5J8M3 183 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 ANGPTL8Q6UXH0 198 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 LRRC34Q8IZ02 419 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 OR5P2Q8WZ92 322 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 OTUB1Q96FW1 271 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-210ENST00000473829 GNRHR2Q96P88 292 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 DUSP26Q9BV47 211 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 BHLHE41Q9C0J9 482 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-210ENST00000473829 CXorf36Q9H7Y0 433 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 ATAD3AQ9NVI7 634 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 KLRF1Q9NZS2 232 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 SPRR3Q9UBC9 169 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 CBLCQ9ULV8 474 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 C15orf41Q9Y2V0 281 aa17.31■□□□□ 0.36
PTCD3-210ENST00000473829 NUP214P35658 2090 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-210ENST00000473829 NCOA6Q14686 2063 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-210ENST00000473829 B4DXG7 233 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 ZNF195O14628 629 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 ABCB7O75027 752 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 IGKV1D-16P01601 117 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 PTPN6P29350 595 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 GABRA3P34903 492 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 KRT20P35900 424 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 PNLIPRP2P54317 469 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 WNT3P56703 355 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 ADORA2A-AS1P86434 159 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 EFR3AQ14156 821 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 SLC10A1Q14973 349 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 ZNHIT3Q15649 155 aaPredicted RBP17.3■□□□□ 0.36
PTCD3-210ENST00000473829 PGS1Q32NB8 556 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 CYP27C1Q4G0S4 372 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 SLC9B1Q4ZJI4 515 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 EXOSC6Q5RKV6 272 aaKnown RBP17.3■□□□□ 0.36
PTCD3-210ENST00000473829 TIGD3Q6B0B8 471 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 OR4F3Q6IEY1 312 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 MFSD12Q6NUT3 480 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 SLC30A6Q6NXT4 461 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 PACS2Q86VP3 889 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 CLECL1Q8IZS7 167 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 PSMA8Q8TAA3 256 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 TMCO6Q96DC7 493 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 C16orf58Q96GQ5 468 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 TEX37Q96LM6 180 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 PRPF18Q99633 342 aaKnown RBP17.3■□□□□ 0.36
PTCD3-210ENST00000473829 DPY30Q9C005 99 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 C3orf14Q9HBI5 128 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 Q9N2J8 555 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 ZCCHC3Q9NUD5 404 aaKnown RBP17.3■□□□□ 0.36
PTCD3-210ENST00000473829 AIG1Q9NVV5 245 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 ZNF446Q9NWS9 450 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 MEMO1Q9Y316 297 aa17.3■□□□□ 0.36
PTCD3-210ENST00000473829 TRGV5A0A0B4J1U4 118 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 TRPC5OSA6NMA1 111 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 NPIPA2E9PIF3 369 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 NPIPA3F8WFD2 350 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 AQP7O14520 342 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 PRRG2O14669 202 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 SNPHO15079 494 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 NKX2-2O95096 273 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 TRPC1P48995 793 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 GAS1P54826 345 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 PHC1P78364 1004 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 SNTA1Q13424 505 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 DUSP5Q16690 384 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 HIST2H2BCQ6DN03 193 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 PAOXQ6QHF9 649 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 GOLGA6L1Q8N7Z2 621 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 CDRT4Q8N9R6 151 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 WDSUB1Q8N9V3 476 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 SLC16A11Q8NCK7 471 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 CEP70Q8NHQ1 597 aa17.29■□□□□ 0.36
PTCD3-210ENST00000473829 PIWIL2Q8TC59 973 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms