RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 LOC101059948A0A1B0GTJ6 334 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 MED19A0JLT2 244 aaPredicted RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 VSTM2BA6NLU5 285 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 G3V4G9 280 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 MATN3O15232 486 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 CNOT3O75175 753 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 CDH16O75309 829 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 BCAR3O75815 825 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 IFNA2P01563 188 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 IGLV2-14P01704 120 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 CLTAP09496 248 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 ZNF853P0CG23 659 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 FCGR1AP12314 374 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TNNI3P19429 210 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 UCP1P25874 307 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 LCN1P31025 176 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 OTX2P32243 289 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 MMP12P39900 470 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 CASP4P49662 377 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 XGP55808 180 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 ATP5J2P56134 94 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 PEX3P56589 373 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 RPS18P62269 152 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 RPS13P62277 151 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 ASPHQ12797 758 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 MFAP5Q13361 173 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 OPCMLQ14982 345 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 RBMS2Q15434 407 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 DPYSL2Q16555 572 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 ZNF260Q3ZCT1 412 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TP53I3Q53FA7 332 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TMEM35AQ53FP2 167 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 DMRTC1Q5HYR2 192 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 FGD3Q5JSP0 725 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 AGAP7PQ5VUJ5 663 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 RNASEKQ6P5S7 137 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 PCSK4Q6UW60 755 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 ZNF562Q6V9R5 426 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 SLC24A5Q71RS6 500 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 CENPQQ7L2Z9 268 aaPredicted RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 PRUNE1Q86TP1 453 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 ARL14Q8N4G2 192 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TEX26Q8N6G2 289 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 FAM98AQ8NCA5 519 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 SLC37A3Q8NCC5 494 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 OR51G2Q8NGK0 314 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 OR52J3Q8NH60 311 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 WDR36Q8NI36 951 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 EFHD2Q96C19 240 aaPredicted RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 PRRC1Q96M27 445 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 C12orf66Q96MD2 445 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 VSTM2LQ96N03 204 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TOX2Q96NM4 488 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 AGAP4Q96P64 663 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 RIT2Q99578 217 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TMEM246Q9BRR3 403 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 LLPHQ9BRT6 129 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 RHNO1Q9BSD3 238 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 SLC25A33Q9BSK2 321 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 APOOQ9BUR5 198 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 TRIM62Q9BVG3 475 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 RBM4Q9BWF3 364 aaKnown RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 PRRG3Q9BZD7 231 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 NRN1Q9NPD7 142 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 SMOXQ9NWM0 555 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 GCNT4Q9P109 453 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 WNT16Q9UBV4 365 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 SUN2Q9UH99 717 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 ANAPC7Q9UJX3 599 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 CDH9Q9ULB4 789 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 FAF1Q9UNN5 650 aaPredicted RBP2.34□□□□□ -2.03
XRN1-210ENST00000472697 TCF19Q9Y242 345 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 GSTK1Q9Y2Q3 226 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 PCDHGB1Q9Y5G3 927 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 PCDH11XQ9BZA7 1347 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 CEP350Q5VT06 3117 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 AK9Q5TCS8 1911 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 DDX60Q8IY21 1712 aaKnown RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 IGLV9-49A0A0B4J1Y8 123 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 LMO7DNF2Z398 122 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 SMAD6O43541 496 aaKnown RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 RANBP6O60518 1105 aaKnown RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 SCELO95171 688 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 TSPAN13O95857 204 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 NR3C1P04150 777 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 SP1P08047 785 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 FRMD6-AS1P0C7T7 363 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 IGHV4-31P0DP07 118 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 WT1P19544 449 aaPredicted RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 MSH3P20585 1137 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 FCARP24071 287 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 MMP11P24347 488 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 USP8P40818 1118 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 RGRP47804 291 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 LEPRP48357 1165 aaKnown RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 GSSP48637 474 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 HSF1Q00613 529 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 DNAJC3Q13217 504 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 C1orf61Q13536 156 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 ITGA9Q13797 1035 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms