RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TEX9Q8N6V9 391 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 ROBO4Q8WZ75 1007 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 NEUROG1Q92886 237 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 C11orf24Q96F05 449 aaPredicted RBP17.01■□□□□ 0.31
SORT1-203ENST00000471996 SHARPINQ9H0F6 387 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 ALG9Q9H6U8 611 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 CES1P1Q9UKY3 287 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
SORT1-203ENST00000471996 H3BML4 177 aa17■□□□□ 0.31
SORT1-203ENST00000471996 FOXE1O00358 373 aaPredicted RBP17■□□□□ 0.31
SORT1-203ENST00000471996 SSX4O60224 188 aa17■□□□□ 0.31
SORT1-203ENST00000471996 SS18L1O75177 396 aaPredicted RBP17■□□□□ 0.31
SORT1-203ENST00000471996 SEMA3DO95025 777 aa17■□□□□ 0.31
SORT1-203ENST00000471996 CD3EP07766 207 aa17■□□□□ 0.31
SORT1-203ENST00000471996 STMN1P16949 149 aa17■□□□□ 0.31
SORT1-203ENST00000471996 IVDP26440 423 aa17■□□□□ 0.31
SORT1-203ENST00000471996 FEN1P39748 380 aaKnown RBP17■□□□□ 0.31
SORT1-203ENST00000471996 CASP9P55211 416 aa17■□□□□ 0.31
SORT1-203ENST00000471996 MORF4L2Q15014 288 aa17■□□□□ 0.31
SORT1-203ENST00000471996 SGCBQ16585 318 aa17■□□□□ 0.31
SORT1-203ENST00000471996 CPSF6Q16630 551 aaKnown RBP eCLIP17■□□□□ 0.31
SORT1-203ENST00000471996 CTU2Q2VPK5 515 aaKnown RBP17■□□□□ 0.31
SORT1-203ENST00000471996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17■□□□□ 0.311e-10■■■■■ 40.2
SORT1-203ENST00000471996 ISCA2Q86U28 154 aa17■□□□□ 0.31
SORT1-203ENST00000471996 OR2M3Q8NG83 312 aa17■□□□□ 0.31
SORT1-203ENST00000471996 OR10H5Q8NGA6 315 aa17■□□□□ 0.31
SORT1-203ENST00000471996 OR5M1Q8NGP8 315 aa17■□□□□ 0.31
SORT1-203ENST00000471996 WDR20Q8TBZ3 569 aa17■□□□□ 0.31
SORT1-203ENST00000471996 GMPPAQ96IJ6 420 aaPredicted RBP17■□□□□ 0.31
SORT1-203ENST00000471996 TRAF4Q9BUZ4 470 aaPredicted RBP17■□□□□ 0.31
SORT1-203ENST00000471996 ESRP2Q9H6T0 727 aaKnown RBP17■□□□□ 0.31
SORT1-203ENST00000471996 SMYD2Q9NRG4 433 aa17■□□□□ 0.31
SORT1-203ENST00000471996 PPP4R1LQ9P1A2 415 aa17■□□□□ 0.31
SORT1-203ENST00000471996 CLEC4AQ9UMR7 237 aa17■□□□□ 0.31
SORT1-203ENST00000471996 OR2M5A3KFT3 312 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 SUPT3HB4E1H0 165 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 UBXN8O00124 270 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
SORT1-203ENST00000471996 SUPT3HO75486 399 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 PIAS1O75925 651 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 PLGP00747 810 aaPredicted RBP16.99■□□□□ 0.31
SORT1-203ENST00000471996 KLK1P06870 262 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 CT45A8P0DMV1 189 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 CT45A9P0DMV2 189 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 CSNK2A2P19784 350 aaPredicted RBP16.99■□□□□ 0.31
SORT1-203ENST00000471996 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
SORT1-203ENST00000471996 SLC6A8P48029 635 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 CTBP2P56545 445 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 LOXL1Q08397 574 aaPredicted RBP16.99■□□□□ 0.31
SORT1-203ENST00000471996 GANABQ14697 944 aaKnown RBP16.99■□□□□ 0.31
SORT1-203ENST00000471996 CT45A2Q5DJT8 189 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 SLC48A1Q6P1K1 146 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 LARP4Q71RC2 724 aaKnown RBP eCLIP16.99■□□□□ 0.31
SORT1-203ENST00000471996 BTBD9Q96Q07 612 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 ATOH8Q96SQ7 321 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 SERPINI1Q99574 410 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 PRRG4Q9BZD6 226 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 GRIP2Q9C0E4 1043 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 ADAM29Q9UKF5 820 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 ANGPTL3Q9Y5C1 460 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 PCDHA9Q9Y5H5 950 aa16.99■□□□□ 0.31
SORT1-203ENST00000471996 C1orf226A1L170 272 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 FAM234BA2RU67 622 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 UGDHO60701 494 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 ERAL1O75616 437 aaKnown RBP16.98■□□□□ 0.31
SORT1-203ENST00000471996 CD8AP01732 235 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 PCSK2P16519 638 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 IL12BP29460 328 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 KRT20P35900 424 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 PNLIPRP2P54317 469 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 DUSP2Q05923 314 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 ZKSCAN8Q15776 578 aaPredicted RBP16.98■□□□□ 0.31
SORT1-203ENST00000471996 NRF1Q16656 503 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.98■□□□□ 0.31
SORT1-203ENST00000471996 STK32CQ86UX6 486 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 FBXO36Q8NEA4 188 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 STEAP2Q8NFT2 490 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 S100PBPQ96BU1 408 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 GPR22Q99680 433 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 ALG2Q9H553 416 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 MED11Q9P086 117 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 AP4B1Q9Y6B7 739 aa16.98■□□□□ 0.31
SORT1-203ENST00000471996 GOLGA6L10A0A0M3HER8 536 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 KERAO60938 352 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 FESP07332 822 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 SRD5A1P18405 259 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 ARL4CP56559 192 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 CORO7P57737 925 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 RAB10P61026 200 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 MRPS35P82673 323 aaKnown RBP16.97■□□□□ 0.31
SORT1-203ENST00000471996 LTB4RQ15722 352 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 CCNYL2Q5T2Q4 361 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 CYB5R2Q6BCY4 276 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 PPP4R4Q6NUP7 873 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 DTX2Q86UW9 622 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 KBTBD8Q8NFY9 601 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 TRIM2Q9C040 744 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 ZBTB26Q9HCK0 441 aa16.97■□□□□ 0.31
SORT1-203ENST00000471996 SAYSD1Q9NPB0 183 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms