RNA–Protein interactions for RNA: ENST00000470701.1

POLR2F-208, Transcript of RNA polymerase II subunit F, human

TSL 3 BASIC

Gene POLR2F, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2F-208	ENST00000470701	DNAJA1	P31689	397 aa	Known RBP	13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	TIMP3	P35625	211 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	KIR2DL3	P43628	341 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	PPIC	P45877	212 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	HTR6	P50406	440 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	ZNF136	P52737	540 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	DNAJB13	P59910	316 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	PLCXD2	Q0VAA5	305 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	CSTF3	Q12996	717 aa	Known RBP	13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	NHSL2	Q5HYW2	709 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	SLC30A6	Q6NXT4	461 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	TMEM81	Q6P7N7	255 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	GPRIN3	Q6ZVF9	776 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	OR6Y1	Q8NGX8	325 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	METTL6	Q8TCB7	284 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	ABTB1	Q969K4	478 aa	Predicted RBP	13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	TRIB1	Q96RU8	372 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	OSBPL11	Q9BXB4	747 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	ACPT	Q9BZG2	426 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	PFDN4	Q9NQP4	134 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	FGFR1OP2	Q9NVK5	253 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	DNAJB12	Q9NXW2	375 aa	Known RBP	13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	PRODH2	Q9UF12	536 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	MAPRE3	Q9UPY8	281 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	USH1C	Q9Y6N9	552 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	HIVEP1	P15822	2718 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	DOCK7	Q96N67	2140 aa		13.72	□□□□□ -0.21
POLR2F-208	ENST00000470701	ACOX3	O15254	700 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	PCDH7	O60245	1069 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	CTAG2	O75638	210 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	DCTN3	O75935	186 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	ATP5F1	P24539	256 aa	Predicted RBP	13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	ASCL1	P50553	236 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	ART1	P52961	327 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	HMGCS1	Q01581	520 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	ZNF628	Q5EBL2	1059 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	NSUN5P2	Q63ZY6	315 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	SCIMP	Q6UWF3	145 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	SLC22A9	Q8IVM8	553 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	WDSUB1	Q8N9V3	476 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	OR9A2	Q8NGT5	310 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	KAT2A	Q92830	837 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	TMBIM1	Q969X1	311 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	EXOSC8	Q96B26	276 aa	Known RBP	13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	APIP	Q96GX9	242 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	TRMO	Q9BU70	441 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	SERHL	Q9NQF3	203 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	KLRF1	Q9NZS2	232 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	CRIM1	Q9NZV1	1036 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	EXO1	Q9UQ84	846 aa	Known RBP	13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	TIMM22	Q9Y584	194 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	MPDZ	O75970	2070 aa		13.71	□□□□□ -0.21
POLR2F-208	ENST00000470701	AKAP9	Q99996	3911 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	GNG14	A0A1W2PPG7	69 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	FRG2C	A6NGY1	282 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	CD8B2	A6NJW9	211 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	SLCO1B7	G3V0H7	640 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	SNPH	O15079	494 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	T	O15178	435 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	HNRNPCL1	O60812	293 aa	Known RBP	13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	TRIM13	O60858	407 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	REM1	O75628	298 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	DRD2	P14416	443 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	AGFG1	P52594	562 aa	Known RBP	13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	IST1	P53990	364 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	DCAF7	P61962	342 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	OCRL	Q01968	901 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	BTK	Q06187	659 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	STX3	Q13277	289 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	SNTA1	Q13424	505 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	3e-6	■■■■■ 30.2
POLR2F-208	ENST00000470701	ZYG11A	Q6WRX3	759 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	ZNF675	Q8TD23	568 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	C16orf78	Q8WTQ4	265 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	RNASE6	Q93091	150 aa	Known RBP	13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	L3HYPDH	Q96EM0	354 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	KCNA7	Q96RP8	456 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	GPATCH1	Q9BRR8	931 aa	Known RBP	13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	POLDIP3	Q9BY77	421 aa	Known RBP	13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	LIME1	Q9H400	295 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	HAO1	Q9UJM8	370 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	EMCN	Q9ULC0	261 aa		13.7	□□□□□ -0.22
POLR2F-208	ENST00000470701	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	MBD3L3	A6NE82	208 aa	Predicted RBP	13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	PRAMEF25	A6NGN4	478 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	OR6C70	A6NIJ9	312 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	CBR3	O75828	277 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	ATP5H	O75947	161 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	ACTL6A	O96019	429 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	CT45A8	P0DMV1	189 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	CT45A9	P0DMV2	189 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	MYL2	P10916	166 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	RIPPLY3	P57055	190 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	CORO7	P57737	925 aa		13.69	□□□□□ -0.22
POLR2F-208	ENST00000470701	ACSM2A	Q08AH3	577 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms