RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 GSTO2Q9H4Y5 243 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 SENP1Q9P0U3 644 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 DCDC2Q9UHG0 476 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
CPSF4-210ENST00000469897 OR10H1Q9Y4A9 318 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 WIF1Q9Y5W5 379 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 CACNA1CQ13936 2221 aa12.04□□□□□ -0.48
CPSF4-210ENST00000469897 SERTM1A2A2V5 107 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 CCDC151A5D8V7 595 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 MYO1GB0I1T2 1018 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 TGM6O95932 706 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 ENO1P06733 434 aaKnown RBP12.03□□□□□ -0.48
CPSF4-210ENST00000469897 DDCP20711 480 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 CHMP24386 653 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 GRK2P25098 689 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 NCBP2P52298 156 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPSF4-210ENST00000469897 CLDN18P56856 261 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 SORDQ00796 357 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 PSG6Q00889 435 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 GAB1Q13480 694 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 KEAP1Q14145 624 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 POU4F3Q15319 338 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 IFT20Q8IY31 132 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 DACH2Q96NX9 599 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 PLEKHF2Q9H8W4 249 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 SIRT5Q9NXA8 310 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 GALNT8Q9NY28 637 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 MED11Q9P086 117 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 DKKL1Q9UK85 242 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 STK38LQ9Y2H1 464 aa12.03□□□□□ -0.48
CPSF4-210ENST00000469897 A8MXE2 369 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 G3V2L1 256 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 UPK1AO00322 258 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 CASKO14936 926 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 SCO2O43819 266 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ATE1O95260 518 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 RAF1P04049 648 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 GSTA1P08263 222 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF708P17019 499 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 MC3RP41968 323 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 CPA2P48052 419 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 DSCR4P56555 118 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 B3GALT5-AS1P59052 145 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ADAM8P78325 824 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 FOXD4Q12950 439 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 BCL2A1Q16548 175 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 IMPG1Q17R60 797 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 DEFB113Q30KQ7 82 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 TMEM107Q6UX40 140 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 CHMP1BQ7LBR1 199 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 CAMKMTQ7Z624 323 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 GRAMD2AQ8IUY3 354 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 UBQLNLQ8IYU4 475 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 OR4K17Q8NGC6 315 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 OR5M1Q8NGP8 315 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 DUSP19Q8WTR2 217 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 RNF138Q8WVD3 245 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 MBD6Q96DN6 1003 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ZFP3Q96NJ6 502 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ALPK1Q96QP1 1244 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 RTN4RQ9BZR6 473 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 STMN4Q9H169 189 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 GLIPR2Q9H4G4 154 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 GSX1Q9H4S2 264 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 FLRT3Q9NZU0 649 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 PPP4R1LQ9P1A2 415 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 CLCF1Q9UBD9 225 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 EMCNQ9ULC0 261 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 C19orf53Q9UNZ5 99 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF337Q9Y3M9 751 aa12.02□□□□□ -0.49
CPSF4-210ENST00000469897 POLR3HQ9Y535 204 aaPredicted RBP12.02□□□□□ -0.49
CPSF4-210ENST00000469897 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 SH3D21A4FU49 640 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 H0YC42 278 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 FADS1O60427 444 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 TNFSF13O75888 250 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 HRGP04196 525 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 HK1P19367 917 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 RFX3P48380 749 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 SUCLG1P53597 346 aaKnown RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 DIO3P55073 304 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 CLDN15P56746 228 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 EEF1A1P68104 462 aaKnown RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 MRPS22P82650 360 aaKnown RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 FAM27E3Q08E93 113 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF763Q0D2J5 394 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 ZNF155Q12901 538 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 CYP27C1Q4G0S4 372 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 FAM71E1Q6IPT2 247 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 NOXRED1Q6NXP6 359 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 PAMR1Q6UXH9 720 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 P4HA3Q7Z4N8 544 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 MARCH3Q86UD3 253 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 OR2M3Q8NG83 312 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 MZB1Q8WU39 189 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 STARD4Q96DR4 205 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms