RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 SMYD1Q8NB12 490 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 KIAA0895Q8NCT3 520 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 MRPL38Q96DV4 380 aaKnown RBP3.16□□□□□ -1.9
CALD1-214ENST00000466704 ZMAT2Q96NC0 199 aaKnown RBP3.16□□□□□ -1.9
CALD1-214ENST00000466704 CBWD1Q9BRT8 395 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 ASB7Q9H672 318 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 JPT2Q9H910 190 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 IL1RAPQ9NPH3 570 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 AGPAT3Q9NRZ7 376 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 MRGBPQ9NV56 204 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 RBAKQ9NYW8 714 aaPredicted RBP3.16□□□□□ -1.9
CALD1-214ENST00000466704 PILRAQ9UKJ1 303 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 UBQLN1Q9UMX0 589 aaKnown RBP3.16□□□□□ -1.9
CALD1-214ENST00000466704 AUP1Q9Y679 476 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 SF3B1O75533 1304 aaKnown RBP eCLIP3.16□□□□□ -1.9
CALD1-214ENST00000466704 UBE4BO95155 1302 aa3.16□□□□□ -1.9
CALD1-214ENST00000466704 FAM208BQ5VWN6 2430 aa3.15□□□□□ -1.9
CALD1-214ENST00000466704 NOTCH3Q9UM47 2321 aa3.15□□□□□ -1.9
CALD1-214ENST00000466704 TDRD15B5MCY1 1934 aaKnown RBP3.15□□□□□ -1.9
CALD1-214ENST00000466704 COL4A6Q14031 1691 aa3.15□□□□□ -1.9
CALD1-214ENST00000466704 ZNF233A6NK53 670 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 HIDE1A8MVS5 230 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ARHGEF33A8MVX0 844 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ZNF732B4DXR9 585 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 LMO7DNF2Z398 122 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 PDXKO00764 312 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 TRAPPC3O43617 180 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 CALUO43852 315 aaPredicted RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 ACSL4O60488 711 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 GRAP2O75791 330 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 CXCL14O95715 111 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 CYP3A5P20815 502 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 IL4RP24394 825 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 FCGR2BP31994 310 aaPredicted RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 FCGR2CP31995 323 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 RPL9P32969 192 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 PPP1R2P41236 205 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 BRCC3P46736 316 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 OR3A1P47881 315 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ZFP36L2P47974 494 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 ABCE1P61221 599 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 TFAMQ00059 246 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 PTK6Q13882 451 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 SMC1AQ14683 1233 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 ZBTB6Q15916 424 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 SNRNP35Q16560 246 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 TCEAL5Q5H9L2 206 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 PLPP4Q5VZY2 271 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ZNF770Q6IQ21 691 aaPredicted RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 DCLRE1AQ6PJP8 1040 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 C17orf107Q6ZR85 190 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 MSANTD1Q6ZTZ1 278 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 TIPARPQ7Z3E1 657 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 ADGRD2Q7Z7M1 963 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 KCNMB4Q86W47 210 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 CBWD2Q8IUF1 395 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 PHC2Q8IXK0 858 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 C12orf56Q8IXR9 622 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ELMOD1Q8N336 334 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 MRPL43Q8N983 215 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 OR13C5Q8NGS8 318 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 GOLGA5Q8TBA6 731 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 UBLCP1Q8WVY7 318 aaPredicted RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 C18orf25Q96B23 403 aaPredicted RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 ANKRD36BP1Q96IX9 119 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 CCDC114Q96M63 670 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 TSPAN18Q96SJ8 248 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 STRADBQ9C0K7 418 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ZBP1Q9H171 429 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ADNPQ9H2P0 1102 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 UBE2TQ9NPD8 197 aaPredicted RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 MRPL17Q9NRX2 175 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 MARCH5Q9NX47 278 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 CGNQ9P2M7 1197 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 TUBGCP4Q9UGJ1 667 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 ADAM28Q9UKQ2 775 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 TRAF3IP3Q9Y228 551 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 SPTBN4Q9H254 2564 aa3.15□□□□□ -1.91
CALD1-214ENST00000466704 TPRP12270 2363 aaKnown RBP3.15□□□□□ -1.91
CALD1-214ENST00000466704 TANC1Q9C0D5 1861 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 DOCK5Q9H7D0 1870 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 GPR179Q6PRD1 2367 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 CCDC162PA2VCL2 907 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 TRIM49BA6NDI0 452 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 SHISA7A6NL88 538 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 A8MU76 341 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 I3L4J1 428 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 PSMA7O14818 248 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 CETN3O15182 167 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 CTDSPLO15194 276 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 ST8SIA3O43173 380 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 SRSF10O75494 262 aaKnown RBP3.14□□□□□ -1.91
CALD1-214ENST00000466704 AKAP3O75969 853 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 MBD3O95983 291 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 HPP00738 406 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 TNNC2P02585 160 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 KRT3P12035 628 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 TNNI1P19237 187 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 CCNE1P24864 410 aa3.14□□□□□ -1.91
CALD1-214ENST00000466704 SRD5A2P31213 254 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms