RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MID2Q9UJV3 735 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 FIS1Q9Y3D6 152 aa15.94■□□□□ 0.14
COL7A1-206ENST00000466591 OTOGQ6ZRI0 2925 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 PDZD2O15018 2839 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 A6NNC1 897 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CLCA1A8K7I4 914 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 SEC22BO75396 215 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 SLITRK5O94991 958 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CHEK2O96017 543 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CT45A8P0DMV1 189 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CT45A9P0DMV2 189 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CPN1P15169 458 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 GRK2P25098 689 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 DPP4P27487 766 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CPOXP36551 454 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 MC3RP41968 323 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 IST1P53990 364 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 DIO3P55073 304 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CT45A2Q5DJT8 189 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 UBQLNLQ8IYU4 475 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 WDSUB1Q8N9V3 476 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 OR7G2Q8NG99 324 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 NINJ1Q92982 152 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 INTS12Q96CB8 462 aaKnown RBP15.93■□□□□ 0.14
COL7A1-206ENST00000466591 VSTM2LQ96N03 204 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 ZFP3Q96NJ6 502 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 SH3GL2Q99962 352 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 SFXN3Q9BWM7 321 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 RBM24Q9BX46 236 aaKnown RBP15.93■□□□□ 0.14
COL7A1-206ENST00000466591 PTGES2Q9H7Z7 377 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 RASSF1Q9NS23 344 aa15.93■□□□□ 0.14
COL7A1-206ENST00000466591 CCM2LQ9NUG4 571 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-206ENST00000466591 A0A1W2PPM1 405 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 CASKO14936 926 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 RGS14O43566 566 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 PLOD3O60568 738 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 IL18BPO95998 194 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 EVI2BP34910 448 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 PTGDSP41222 190 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 EEF1A1P68104 462 aaKnown RBP15.92■□□□□ 0.14
COL7A1-206ENST00000466591 GAB1Q13480 694 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 CEBPEQ15744 281 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 FBXL19-AS1Q494R0 122 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 EEF1A1P5Q5VTE0 462 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 PPP4R4Q6NUP7 873 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 GALNT18Q6P9A2 607 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 GCNT2Q8N0V5 402 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 MEIOBQ8N635 442 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 C9orf106Q8NAJ2 232 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 PPCSQ9HAB8 311 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 ST6GALNAC2Q9UJ37 374 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 FBXL2Q9UKC9 423 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 EXPH5Q8NEV8 1989 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 POLQO75417 2590 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 ADGRG4Q8IZF6 3080 aa15.92■□□□□ 0.14
COL7A1-206ENST00000466591 CCDC168Q8NDH2 2452 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 DCHS2Q6V1P9 2916 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 SLC28A1O00337 649 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 PLOD2O00469 737 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 TSPAN2O60636 221 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 SMNDC1O75940 238 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL7A1-206ENST00000466591 RSL1D1O76021 490 aaKnown RBP15.91■□□□□ 0.14
COL7A1-206ENST00000466591 KCNH1O95259 989 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 UROSP10746 265 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 CPA3P15088 417 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 HK1P19367 917 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 CHMP24386 653 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 STARP49675 285 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 FOXA1P55317 472 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 DSCR4P56555 118 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-206ENST00000466591 EEFSECP57772 596 aaKnown RBP15.91■□□□□ 0.14
COL7A1-206ENST00000466591 TESK1Q15569 626 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 NPSR1Q6W5P4 371 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 FRMD7Q6ZUT3 714 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 IKBIPQ70UQ0 350 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 CDC20BQ86Y33 519 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 CNEP1R1Q8N9A8 125 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 OR4N2Q8NGD1 307 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 ZFP28Q8NHY6 868 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 FAM76AQ8TAV0 307 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 LINC01560Q8TB33 94 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 WNT2BQ93097 391 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 TBL1XR1Q9BZK7 514 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 MYNNQ9NPC7 610 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 EQTNQ9NQ60 294 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 CBLCQ9ULV8 474 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 PLEKHA6Q9Y2H5 1048 aa15.91■□□□□ 0.14
COL7A1-206ENST00000466591 WBP11Q9Y2W2 641 aaKnown RBP15.91■□□□□ 0.14
COL7A1-206ENST00000466591 A0A087WV62 115 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 MYO1GB0I1T2 1018 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 G3V2L1 256 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 PROCP04070 461 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 FREM3P0C091 2139 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 EPXP11678 715 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 SORDQ00796 357 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 HSPB3Q12988 150 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 KEAP1Q14145 624 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 CYP27C1Q4G0S4 372 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 OR2A2Q6IF42 318 aa15.9■□□□□ 0.14
COL7A1-206ENST00000466591 NOXRED1Q6NXP6 359 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms