RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 NUP214P35658 2090 aaPredicted RBP19.86■□□□□ 0.77
LIME1-203ENST00000465591 PDZD2O15018 2839 aa19.86■□□□□ 0.77
LIME1-203ENST00000465591 DOCK7Q96N67 2140 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 NEFHP12036 1026 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 IGFBP2P18065 325 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 TOMM20Q15388 145 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 GALNTL6Q49A17 601 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 SH2D4BQ5SQS7 431 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 VASNQ6EMK4 673 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 LARP4Q71RC2 724 aaKnown RBP eCLIP19.85■□□□□ 0.77
LIME1-203ENST00000465591 GDF7Q7Z4P5 450 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 DDIASQ8IXT1 998 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 CLYBLQ8N0X4 340 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 OR2L13Q8N349 312 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 SPOCK3Q9BQ16 436 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 UGT2B28Q9BY64 529 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 RUBCNLQ9H714 662 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 PCDHGB3Q9Y5G1 929 aa19.85■□□□□ 0.77
LIME1-203ENST00000465591 COQ9O75208 318 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 CHEK2O96017 543 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 BPGMP07738 259 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 GABRA1P14867 456 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 BMP7P18075 431 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 KRT71Q3SY84 523 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 ACSF3Q4G176 576 aaPredicted RBP19.84■□□□□ 0.77
LIME1-203ENST00000465591 MEX3BQ6ZN04 569 aaKnown RBP19.84■□□□□ 0.77
LIME1-203ENST00000465591 TMCO6Q96DC7 493 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 C3orf30Q96M34 536 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 PRDM14Q9GZV8 571 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 DDX18Q9NVP1 670 aaKnown RBP19.84■□□□□ 0.77
LIME1-203ENST00000465591 FLRT3Q9NZU0 649 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 ZDHHC2Q9UIJ5 367 aa19.84■□□□□ 0.77
LIME1-203ENST00000465591 PDPK1O15530 556 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 ABCB7O75027 752 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 SLITRK5O94991 958 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 HOXD4P09016 255 aaPredicted RBP19.83■□□□□ 0.77
LIME1-203ENST00000465591 BCKDHAP12694 445 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 CYP4B1P13584 511 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 ZFP36L2P47974 494 aaKnown RBP19.83■□□□□ 0.77
LIME1-203ENST00000465591 PNLIPRP2P54317 469 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 GAS1P54826 345 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 HSPB3Q12988 150 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 GAB1Q13480 694 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 PDE7AQ13946 482 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 XKR7Q5GH72 579 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 NHSL2Q5HYW2 709 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 OR5M10Q6IEU7 315 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 ZNF764Q96H86 408 aaPredicted RBP19.83■□□□□ 0.77
LIME1-203ENST00000465591 PKNOX2Q96KN3 472 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 REEP4Q9H6H4 257 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 EML4Q9HC35 981 aaKnown RBP19.83■□□□□ 0.77
LIME1-203ENST00000465591 KCNJ16Q9NPI9 418 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 FBXL2Q9UKC9 423 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 RAB21Q9UL25 225 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 OR10H1Q9Y4A9 318 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 WIF1Q9Y5W5 379 aa19.83■□□□□ 0.77
LIME1-203ENST00000465591 TACC2O95359 2948 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 TBX19O60806 448 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 EFNA1P20827 205 aaPredicted RBP19.82■□□□□ 0.76
LIME1-203ENST00000465591 MSX1P28360 303 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 IL12BP29460 328 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 EFR3AQ14156 821 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 RIPPLY2Q5TAB7 128 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 NAXEQ8NCW5 288 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 PPCDCQ96CD2 204 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 WDYHV1Q96HA8 205 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 OR2B2Q9GZK3 357 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 CSMD2Q7Z408 3487 aa19.82■□□□□ 0.76
LIME1-203ENST00000465591 AHRRA9YTQ3 701 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 CBR3O75828 277 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 KRT20P35900 424 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 FRKP42685 505 aaPredicted RBP19.81■□□□□ 0.76
LIME1-203ENST00000465591 KRTAP10-9P60411 292 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 EXOC3L1Q86VI1 746 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 PLCZ1Q86YW0 608 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 TNIP2Q8NFZ5 429 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 NUDT8Q8WV74 236 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 ABTB1Q969K4 478 aaPredicted RBP19.81■□□□□ 0.76
LIME1-203ENST00000465591 LMF2Q9BU23 707 aaKnown RBP19.81■□□□□ 0.76
LIME1-203ENST00000465591 RTN4RQ9BZR6 473 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 ZNF395Q9H8N7 513 aaPredicted RBP19.81■□□□□ 0.76
LIME1-203ENST00000465591 SH3BP4Q9P0V3 963 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 CAMK2AQ9UQM7 478 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 TMED5Q9Y3A6 229 aa19.81■□□□□ 0.76
LIME1-203ENST00000465591 GXYLT2A0PJZ3 443 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 ITM2AO43736 263 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 PEX11AO75192 247 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 SKAP2O75563 359 aaPredicted RBP19.8■□□□□ 0.76
LIME1-203ENST00000465591 LYPLA1O75608 230 aaPredicted RBP19.8■□□□□ 0.76
LIME1-203ENST00000465591 EPPINO95925 133 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 GRK2P25098 689 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 SERPINB5P36952 375 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 SERPINB4P48594 390 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 PSPHP78330 225 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 CYP27C1Q4G0S4 372 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 MED12LQ86YW9 2145 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 EQTNQ9NQ60 294 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 CBLCQ9ULV8 474 aa19.8■□□□□ 0.76
LIME1-203ENST00000465591 CCDC168Q8NDH2 2452 aa19.79■□□□□ 0.76
LIME1-203ENST00000465591 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms