RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 RHBDD1Q8TEB9 315 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 CNRIP1Q96F85 164 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-205ENST00000464187 COL21A1Q96P44 957 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 ZNF607Q96SK3 696 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 TREX2Q9BQ50 279 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-205ENST00000464187 PLGRKTQ9HBL7 147 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 LYRM4Q9HD34 91 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 PLCXD1Q9NUJ7 323 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 TRPC4Q9UBN4 977 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
COL5A1-205ENST00000464187 GPC6Q9Y625 555 aaPredicted RBP13.58□□□□□ -0.24
COL5A1-205ENST00000464187 SCN2AQ99250 2005 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 A0A1W2PS29 197 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FITM1A5D6W6 292 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 H3BMH7 237 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 LDOC1O95751 146 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 INHBBP09529 407 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 GABRB1P18505 474 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 CSNK2BP67870 215 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FUT5Q11128 374 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 TCF15Q12870 199 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FOXD4Q12950 439 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FAM53BQ14153 422 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 TCTN3Q6NUS6 607 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 OLIG3Q7RTU3 272 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ARHGAP22Q7Z5H3 698 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 COMTD1Q86VU5 262 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 RBM45Q8IUH3 476 aaKnown RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 LACC1Q8IV20 430 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 SHISA5Q8N114 240 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 RCBTB1Q8NDN9 531 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 VANGL1Q8TAA9 524 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 XAGE5Q8WWM1 108 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ATOH1Q92858 354 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 OTUB1Q96FW1 271 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 DHRS1Q96LJ7 313 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ZNF354BQ96LW1 612 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 WFDC6Q9BQY6 131 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FKBP14Q9NWM8 211 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 SEC14L3Q9UDX4 400 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FTSJ1Q9UET6 329 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 PSORS1C1Q9UIG5 152 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 A0A0A6YYC8 382 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 IGHV5-10-1A0A0J9YXX1 117 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM247A6NEH6 219 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 I3L1I5 382 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 M0R129 80 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 FOXS1O43638 330 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 OR2B3O76000 313 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 GASTP01350 101 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ANKRD34CP0C6C1 535 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 C8orf89P0DMQ9 161 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 NR2F1P10589 423 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ELAVL4P26378 380 aaKnown RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 PSMB9P28065 219 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 TLX1P31314 330 aaPredicted RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 IDH2P48735 452 aaKnown RBP13.57□□□□□ -0.24
COL5A1-205ENST00000464187 GRM7Q14831 915 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 MLIPQ5VWP3 458 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 DEF8Q6ZN54 512 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ZBTB46Q86UZ6 589 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 RASSF5Q8WWW0 418 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 BCL7BQ9BQE9 202 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 COPS4Q9BT78 406 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 SEMA3GQ9NS98 782 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 ENTPD4Q9Y227 616 aa13.57□□□□□ -0.24
COL5A1-205ENST00000464187 RDH16O75452 317 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 NSA2O95478 260 aaKnown RBP13.56□□□□□ -0.24
COL5A1-205ENST00000464187 LCKP06239 509 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 CHRM4P08173 479 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 FEN1P39748 380 aaKnown RBP13.56□□□□□ -0.24
COL5A1-205ENST00000464187 MLLT10P55197 1068 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 SKP1P63208 163 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 TEKQ02763 1124 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 LASP1Q14847 261 aaKnown RBP13.56□□□□□ -0.24
COL5A1-205ENST00000464187 SEC23BQ15437 767 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM107Q6UX40 140 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 CCDC116Q8IYX3 515 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 CA13Q8N1Q1 262 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 DEPDC4Q8N2C3 294 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 OR1L3Q8NH93 324 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 GFM1Q96RP9 751 aaKnown RBP13.56□□□□□ -0.24
COL5A1-205ENST00000464187 YIPF4Q9BSR8 244 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 ENAMQ9NRM1 1142 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 FGF21Q9NSA1 209 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 ACAD8Q9UKU7 415 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 SPACA6W5XKT8 324 aa13.56□□□□□ -0.24
COL5A1-205ENST00000464187 ZAR1LA6NP61 321 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CYR61O00622 381 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 ACP1P24666 158 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 PPP2R1BP30154 601 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 NUDT6P53370 316 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms