RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 NF2P35240 595 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TRIM23P36406 574 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ACADVLP49748 655 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 PPT1P50897 306 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CTAG1AP78358 180 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 IL10RBQ08334 325 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 BNIP1Q12981 228 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ELAVL3Q14576 367 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 SSX2Q16385 188 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 MTHFSDQ2M296 383 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ALKBH6Q3KRA9 238 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 POM121L1PQ3SYA9 428 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 MOGAT2Q3SYC2 334 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 SPANXN2Q5MJ10 180 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 AP1ARQ63HQ0 302 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 PDPK2PQ6A1A2 396 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 SLC39A4Q6P5W5 647 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 DEGS2Q6QHC5 323 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 IL17RELQ6ZVW7 336 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC60Q8IWA6 550 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CDK20Q8IZL9 346 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 EID3Q8N140 333 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 LRRC75A-AS1Q8N1F1 130 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 SPATA4Q8NEY3 305 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 NUP37Q8NFH4 326 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 OR6S1Q8NH40 331 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 OR52N5Q8NH56 324 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TRMT10AQ8TBZ6 339 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 MAPK15Q8TD08 544 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 U2AF1L4Q8WU68 220 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC107Q8WV48 283 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 RPL3LQ92901 407 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 FAM71F1Q96KD3 344 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 GUCD1Q96NT3 240 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CATSPER2Q96P56 530 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TSSK2Q96PF2 358 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 CHP1Q99653 195 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 C19orf43Q9BQ61 176 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 LLPHQ9BRT6 129 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 URM1Q9BTM9 101 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 RPP25Q9BUL9 199 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 PRRG4Q9BZD6 226 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ROPN1BQ9BZX4 212 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 NACA2Q9H009 215 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 MIS12Q9H081 205 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 IQCGQ9H095 443 aaKnown RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 Q9H8V8 135 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ANKRA2Q9H9E1 313 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 RAB18Q9NP72 206 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 GSN-AS1Q9NRJ2 163 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TEX10Q9NXF1 929 aaPredicted RBP3.38□□□□□ -1.87
ITGB1-208ENST00000464001 PKD2L2Q9NZM6 624 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 B3GAT1Q9P2W7 334 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 P2RX2Q9UBL9 471 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 ANGPTL2Q9UKU9 493 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 B9D1Q9UPM9 204 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 SLC9A8Q9Y2E8 581 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 OR10H1Q9Y4A9 318 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 SLCO1B1Q9Y6L6 691 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 PCDH11YQ9BZA8 1340 aa3.38□□□□□ -1.87
ITGB1-208ENST00000464001 TRAV26-1A0A087WT03 109 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 A0A087WUV0 522 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 FAM240BA0A1B0GVZ2 78 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 TCP11X1B4DZS4 312 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 NPIPA2E9PIF3 369 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 PPIAL4DF5H284 164 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 M0R296 226 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 EPHB6O15197 1021 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 YKT6O15498 198 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 OR1F1O43749 312 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CLPXO76031 633 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 VTNP04004 478 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 SFTPBP07988 381 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 F3P13726 295 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CYP11B1P15538 503 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 NCK1P16333 377 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF3P17036 446 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 ANXA13P27216 316 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 GJB2P29033 226 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 DUTP33316 252 aaKnown RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 RPL21P46778 160 aaKnown RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 RPS5P46782 204 aaKnown RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 SLC6A8P48029 635 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CLCN4P51793 760 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 MAB21L1Q13394 359 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 XRCC4Q13426 336 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 HERC3Q15034 1050 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CA9Q16790 459 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 HKDC1Q2TB90 917 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 NKAIN1Q4KMZ8 207 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 UGT3A1Q6NUS8 523 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CTR9Q6PD62 1173 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 SLC25A47Q6Q0C1 308 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM207Q6UWW9 146 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 C16orf62Q7Z3J2 963 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 MYOCDQ8IZQ8 938 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 RYBPQ8N488 228 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 COMMD1Q8N668 190 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 TRIML2Q8N7C3 387 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms