RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
XRN1-203ENST00000463916 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 TMEM120BA0PK00 339 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 PRAMEF25A6NGN4 478 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 C19orf84I3L1E1 186 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 BCKDKO14874 412 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.51
XRN1-203ENST00000463916 HPNP05981 417 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 MYZAPP0CAP1 466 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 AGAP20933 346 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 ACVR2AP27037 513 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 PNLIPRP2P54317 469 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 MANFP55145 182 aaKnown RBP11.83□□□□□ -0.51
XRN1-203ENST00000463916 MAGOHP61326 146 aaKnown RBP11.83□□□□□ -0.51
XRN1-203ENST00000463916 BST1Q10588 318 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 SNTA1Q13424 505 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 ZNF630Q2M218 657 aaPredicted RBP11.83□□□□□ -0.51
XRN1-203ENST00000463916 EIPR1Q53HC9 387 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 OR5M10Q6IEU7 315 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 SLC30A6Q6NXT4 461 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 HOMEZQ8IX15 550 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 OR1J4Q8NGS1 313 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 RNF138Q8WVD3 245 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 SDCCAG3Q96C92 435 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 GIMAP5Q96F15 307 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 RTN4RQ9BZR6 473 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 EQTNQ9NQ60 294 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 SERHLQ9NQF3 203 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 ALKBH4Q9NXW9 302 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 ATP6V1HQ9UI12 483 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 MAPRE3Q9UPY8 281 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 SLC6A5Q9Y345 797 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 RAP2CQ9Y3L5 183 aa11.83□□□□□ -0.51
XRN1-203ENST00000463916 KLF2Q9Y5W3 355 aaPredicted RBP11.83□□□□□ -0.51
XRN1-203ENST00000463916 SNPHO15079 494 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 ERLIN1O75477 346 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 G6PDP11413 515 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 CYP4B1P13584 511 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 GRK2P25098 689 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 IL12BP29460 328 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 GPC1P35052 558 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 MAP3K8P41279 467 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 PRKAG1P54619 331 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 GAS1P54826 345 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 NUP107P57740 925 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 STX3Q13277 289 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 TOMM20Q15388 145 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 WIPI1Q5MNZ9 446 aaPredicted RBP11.83□□□□□ -0.52
XRN1-203ENST00000463916 RIMKLAQ8IXN7 391 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 PIK3R3Q92569 461 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 SARAFQ96BY9 339 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 TLCD1Q96CP7 247 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 TMCO6Q96DC7 493 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 MTERF3Q96E29 417 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 ZBED6CLQ96FA7 236 aaPredicted RBP11.83□□□□□ -0.52
XRN1-203ENST00000463916 TIMP4Q99727 224 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 LMF2Q9BU23 707 aaKnown RBP11.83□□□□□ -0.52
XRN1-203ENST00000463916 AKTIPQ9H8T0 292 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 TMBIM4Q9HC24 238 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 SIRT3Q9NTG7 399 aaPredicted RBP11.83□□□□□ -0.52
XRN1-203ENST00000463916 ACSS1Q9NUB1 689 aaPredicted RBP11.83□□□□□ -0.52
XRN1-203ENST00000463916 PNPOQ9NVS9 261 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 NTMQ9P121 344 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
XRN1-203ENST00000463916 CACNA1CQ13936 2221 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 PHF3Q92576 2039 aaKnown RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 GXYLT2A0PJZ3 443 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 KDM4EB2RXH2 506 aaPredicted RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 ABCB7O75027 752 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 CLDN14O95500 239 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 IGKV1D-16P01601 117 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 ELAVL4P26378 380 aaKnown RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 MAPK1P28482 360 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 GABRA3P34903 492 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 RPL14P50914 215 aaKnown RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 DIO3P55073 304 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 CYP27C1Q4G0S4 372 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 YRDCQ86U90 279 aaKnown RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 CCDC71Q8IV32 467 aaPredicted RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 FAM83FQ8NEG4 500 aaPredicted RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 MGARPQ8TDB4 240 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 HOXB13Q92826 284 aaPredicted RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 C16orf58Q96GQ5 468 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 TTYH2Q9BSA4 534 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 FBXL2Q9UKC9 423 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 CBLCQ9ULV8 474 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 RNF6Q9Y252 685 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 C15orf38-AP3S2A0A0A6YYH1 394 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 IFI6P09912 130 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 GLI4P10075 376 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 PRPS2P11908 318 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 KRT20P35900 424 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 HPCAL1P37235 193 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 EMX2Q04743 252 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 CRYZQ08257 329 aaKnown RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 CASP8Q14790 479 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 DCST1Q5T197 706 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 WLSQ5T9L3 541 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms