RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TSPAN2O60636 221 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 REM1O75628 298 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 KRT34O76011 436 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 KCNH1O95259 989 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 KRT75O95678 551 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 SP1P08047 785 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 CCL3P10147 92 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 CD46P15529 392 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 KRT20P35900 424 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 PIGAP37287 484 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 PNLIPRP2P54317 469 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 MRPS22P82650 360 aaKnown RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 CYLC2Q14093 348 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 DECR1Q16698 335 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 SOWAHCQ53LP3 525 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 COLEC12Q5KU26 742 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 DESI1Q6ICB0 168 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 TNFAIP8L2Q6P589 184 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 DLEU7Q6UYE1 221 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 NUP54Q7Z3B4 507 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 RNF130Q86XS8 419 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 TREML1Q86YW5 311 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 MSRB3Q8IXL7 192 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 DPP10Q8N608 796 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 BCORP1Q8N888 145 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 COX18Q8N8Q8 333 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 Q8NA96 180 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 GOLM1Q8NBJ4 401 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 TMEM178AQ8NBL3 297 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 PSD4Q8NDX1 1056 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 FAM13CQ8NE31 585 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 OR5M3Q8NGP4 307 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 RP9Q8TA86 221 aaKnown RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 PNPT1Q8TCS8 783 aaKnown RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 PAQR8Q8TEZ7 354 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 CDS1Q92903 461 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 HGDQ93099 445 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 EFHD2Q96C19 240 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 RMND5BQ96G75 393 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 SLC35A4Q96G79 324 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 AURKBQ96GD4 344 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 C5orf34Q96MH7 638 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 OR51I1Q9H343 314 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 TPT1P8Q9HAU6 139 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 SH2D2AQ9NP31 389 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 TIMMDC1Q9NPL8 285 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 KLHL1Q9NR64 748 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 LUZP4Q9P127 313 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 MAP10Q9P2G4 905 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 RALYQ9UKM9 306 aaKnown RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 PCDHGB6Q9Y5F9 930 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 CHCHD2Q9Y6H1 151 aaPredicted RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 KCNE3Q9Y6H6 103 aa10.85□□□□□ -0.67
CPNE1-221ENST00000462352 SMG1Q96Q15 3661 aaKnown RBP10.85□□□□□ -0.67
CPNE1-221ENST00000462352 TRBV5-3A0A0A0MS03 114 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 OR6C70A6NIJ9 312 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 BBIP1A8MTZ0 92 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 NME2P1O60361 137 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 UGT2B11O75310 529 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 DCTN3O75935 186 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 SOX30O94993 753 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 KCNK2O95069 426 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 IL33O95760 270 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 IGKV1D-16P01601 117 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 OR12D1P0DN82 309 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 NME2P22392 152 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 IL12BP29460 328 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 RFX3P48380 749 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 KHKP50053 298 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 MVDP53602 400 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 PSMD4P55036 377 aaKnown RBP10.84□□□□□ -0.67
CPNE1-221ENST00000462352 POU6F2P78424 691 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-221ENST00000462352 STX5Q13190 355 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 NFYCQ13952 458 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 MMEL1Q495T6 779 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 COQ5Q5HYK3 327 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 SLC22A10Q63ZE4 541 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 GALNTL5Q7Z4T8 443 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 DHDDSQ86SQ9 333 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 POU5F2Q8N7G0 328 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 CCDC197Q8NCU1 140 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 DNAJB8Q8NHS0 232 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 FAM110BQ8TC76 370 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 BCAS4Q8TDM0 211 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 DIO2Q92813 273 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 COL21A1Q96P44 957 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 ADOQ96SZ5 270 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 BTBD2Q9BX70 525 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 IL1RL2Q9HB29 575 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 SACM1LQ9NTJ5 587 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 VAPAQ9P0L0 249 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 MRTO4Q9UKD2 239 aaKnown RBP10.84□□□□□ -0.67
CPNE1-221ENST00000462352 PCDHGB3Q9Y5G1 929 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 PCDHGA10Q9Y5H3 936 aa10.84□□□□□ -0.67
CPNE1-221ENST00000462352 CLIC1O00299 241 aa10.83□□□□□ -0.68
CPNE1-221ENST00000462352 HMGN4O00479 90 aa10.83□□□□□ -0.68
CPNE1-221ENST00000462352 NDUFAB1O14561 156 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms