RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 MKL2Q9ULH7 1088 aa13.12□□□□□ -0.31
GTF3C5-208ENST00000461871 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
GTF3C5-208ENST00000461871 GPR55Q9Y2T6 319 aaPredicted RBP13.12□□□□□ -0.31
GTF3C5-208ENST00000461871 CHD8Q9HCK8 2581 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 CCDC187A0A096LP49 1063 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 AGAP5A6NIR3 686 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 BRINP1O60477 761 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 IGHEP01854 428 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 HEXBP07686 556 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 PABPC4LP0CB38 370 aaKnown RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 UQCRBP14927 111 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 RPS4Y1P22090 263 aaKnown RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 IFNA8P32881 189 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 GABRA3P34903 492 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 EMP2P54851 167 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 SLC37A1P57057 533 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 VLDLRP98155 873 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 PSG6Q00889 435 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 TAF11Q15544 211 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 TRIP6Q15654 476 aaKnown RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 TMEM164Q5U3C3 297 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 MLIPQ5VWP3 458 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 TMEM205Q6UW68 189 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 RAB11FIP2Q7L804 512 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 SLC44A2Q8IWA5 706 aaPredicted RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 CMIPQ8IY22 773 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 ZNF619Q8N2I2 560 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 METTL27Q8N6F8 245 aaPredicted RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 OR8K3Q8NH51 312 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 CDS1Q92903 461 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 NAF1Q96HR8 494 aaKnown RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 CIB1Q99828 191 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 RBM4Q9BWF3 364 aaKnown RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 SEMA6AQ9H2E6 1030 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 RUBCNLQ9H714 662 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 REEP1Q9H902 201 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 COPS7AQ9UBW8 275 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 GPN3Q9UHW5 284 aaPredicted RBP13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 OAZ3Q9UMX2 235 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 KCNE3Q9Y6H6 103 aa13.11□□□□□ -0.31
GTF3C5-208ENST00000461871 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ARRDC5A6NEK1 342 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 IDSB3KWA1 339 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 C9J4A7 227 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 TO15178 435 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ALOX12BO75342 701 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 JRKO75564 520 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 CDC123O75794 336 aaPredicted RBP13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 TIAF1O95411 115 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 DDAH2O95865 285 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 MT-CO3P00414 261 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ZNF23P17027 643 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ENDOUP21128 410 aaKnown RBP13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 PIGAP37287 484 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 DCTP40126 519 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 EXOSC7Q15024 291 aaKnown RBP13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 LRRC36Q1X8D7 754 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 SFT2D3Q587I9 215 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 MFSD4BQ5TF39 518 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 STPG1Q5TH74 334 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 TYW3Q6IPR3 259 aaKnown RBP13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 FRRS1Q6ZNA5 592 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 DGAT2L6Q6ZPD8 337 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 OR1N1Q8NGS0 311 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 OR52P1PQ8NH57 321 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 C16orf52Q8NHV5 167 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 HSPBAP1Q96EW2 488 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 PIP5K1AQ99755 562 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 PSD2Q9BQI7 771 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 CNPPD1Q9BV87 410 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 RBCK1Q9BYM8 510 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 SEMA4CQ9C0C4 833 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 GABARAPL1Q9H0R8 117 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 PNO1Q9NRX1 252 aaKnown RBP13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 KCND3Q9UK17 655 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 SLC13A4Q9UKG4 626 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ACAD8Q9UKU7 415 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 ERVK-19Q9WJR5 959 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 SH3GLB1Q9Y371 365 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 PCDHGA10Q9Y5H3 936 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 V9GYQ6 96 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
GTF3C5-208ENST00000461871 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 PCNX2A6NKB5 2137 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 FAM149AA5PLN7 773 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
GTF3C5-208ENST00000461871 H0YAE9 185 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms