RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CSF2P04141 144 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ASNSP08243 561 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF883P0CG24 379 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 PPIAL4GP0DN37 164 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 PVRP15151 417 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 CYP11B1P15538 503 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 RFC2P35250 354 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ETV5P41161 510 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ELK3P41970 407 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 PTGFRP43088 359 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 GSK3BP49841 420 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 PRELPP51888 382 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 MESDQ14696 234 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 RAB35Q15286 201 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 SLC36A3Q495N2 470 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 LGSNQ5TDP6 509 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 METTL11BQ5VVY1 283 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 MEDAGQ5VYS4 303 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 SYT10Q6XYQ8 523 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF497Q6ZNH5 498 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 LRRC70Q7Z2Q7 622 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 PPP1R42Q7Z4L9 355 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ANKRD37Q7Z713 158 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 CCDC71Q8IV32 467 aaPredicted RBP2.44□□□□□ -2.02
HDAC6-212ENST00000461608 GMCL1P1Q8NEA9 526 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 RLN3Q8WXF3 142 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 TOMM40LQ969M1 308 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 RAB7BQ96AH8 199 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 TADA1Q96BN2 335 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 UPRTQ96BW1 309 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 NTNG2Q96CW9 530 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 VPS39Q96JC1 886 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 TBC1D10AQ9BXI6 508 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 GSDMCQ9BYG8 508 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 NFKBIZQ9BYH8 718 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 ZBP1Q9H171 429 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 RNF41Q9H4P4 317 aaPredicted RBP2.44□□□□□ -2.02
HDAC6-212ENST00000461608 EXOSC3Q9NQT5 275 aaKnown RBP2.44□□□□□ -2.02
HDAC6-212ENST00000461608 AGPAT5Q9NUQ2 364 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 C6orf203Q9P0P8 240 aaPredicted RBP2.44□□□□□ -2.02
HDAC6-212ENST00000461608 CYTH4Q9UIA0 394 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 LAMP5Q9UJQ1 280 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 NTNG1Q9Y2I2 539 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 SPACA6W5XKT8 324 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 FER1L5A0AVI2 2057 aa2.44□□□□□ -2.02
HDAC6-212ENST00000461608 SF3B1O75533 1304 aaKnown RBP eCLIP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SALL1Q9NSC2 1324 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 A0A1W2PPR1 153 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TRABD2BA6NFA1 517 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 A8MUI8 341 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 E9PQ18 207 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 H0YL77 283 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 H3BMH7 237 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 MAGEB3O15480 346 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 GMFGO60234 142 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 RANBP6O60518 1105 aaKnown RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 KBTBD11O94819 623 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SEMA4FO95754 770 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 OAS1P00973 400 aaKnown RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 IGHV3-13P01766 116 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 IGHV3-9P01782 118 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 HOXD4P09016 255 aaPredicted RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 GSTT2P0CG29 244 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 GSTT2BP0CG30 244 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ZCCHC18P0CG32 403 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TSPY4P0CV99 314 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TSPY10P0CW01 314 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 EPB41P11171 864 aaKnown RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SOX6P35712 828 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 PTGER3P43115 390 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 BRCC3P46736 316 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ARHGDIAP52565 204 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SLC8A3P57103 927 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 BDH1Q02338 343 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ELP6Q0PNE2 266 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TFDP1Q14186 410 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TRIP10Q15642 601 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ZKSCAN8Q15776 578 aaPredicted RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ZIC1Q15915 447 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 C17orf58Q2M2W7 97 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 HIGD2BQ4VC39 106 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ATAD3BQ5T9A4 648 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SLC25A24Q6NUK1 477 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SCYL2Q6P3W7 929 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 IFNEQ86WN2 208 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 HSCBQ8IWL3 235 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 POM121L12Q8N7R1 296 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 ZNF491Q8N8L2 437 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TBCKQ8TEA7 893 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TFB1MQ8WVM0 346 aaKnown RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 IL1F10Q8WWZ1 152 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 DTNBP1Q96EV8 351 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 C11orf24Q96F05 449 aaPredicted RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 SDSLQ96GA7 329 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TXN2Q99757 166 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 VGLL1Q99990 258 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 CCDC28BQ9BUN5 200 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 POLR1EQ9GZS1 481 aaKnown RBP2.43□□□□□ -2.02
HDAC6-212ENST00000461608 NT5C3AQ9H0P0 336 aa2.43□□□□□ -2.02
HDAC6-212ENST00000461608 TIGARQ9NQ88 270 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms