RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZNF836Q6ZNA1 936 aa18.88■□□□□ 0.61
CCM2-203ENST00000461377 PEX5LQ8IYB4 626 aa18.88■□□□□ 0.61
CCM2-203ENST00000461377 CDRT4Q8N9R6 151 aa18.88■□□□□ 0.61
CCM2-203ENST00000461377 OR9A4Q8NGU2 314 aa18.88■□□□□ 0.61
CCM2-203ENST00000461377 IL4I1Q96RQ9 567 aa18.88■□□□□ 0.61
CCM2-203ENST00000461377 FOXQ1Q9C009 403 aa18.88■□□□□ 0.61
CCM2-203ENST00000461377 LILRA5A6NI73 299 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CPSF4LA6NMK7 179 aaKnown RBP18.87■□□□□ 0.61
CCM2-203ENST00000461377 CLPXO76031 633 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CCNYL3P0C7X3 344 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 PIPP12273 146 aaPredicted RBP18.87■□□□□ 0.61
CCM2-203ENST00000461377 CD36P16671 472 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 TNNI3P19429 210 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 GSTM3P21266 225 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 MAOBP27338 520 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 TRHRP34981 398 aaPredicted RBP18.87■□□□□ 0.61
CCM2-203ENST00000461377 RGS8P57771 180 aaPredicted RBP18.87■□□□□ 0.61
CCM2-203ENST00000461377 RACK1P63244 317 aaKnown RBP18.87■□□□□ 0.61
CCM2-203ENST00000461377 ST3GAL3Q11203 375 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 DUSP8Q13202 625 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 MOGQ16653 247 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CASP12Q6UXS9 341 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CTHRC1Q96CG8 243 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 STACQ99469 402 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CDCA4Q9BXL8 241 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CACYBPQ9HB71 228 aaKnown RBP18.87■□□□□ 0.61
CCM2-203ENST00000461377 DUSP22Q9NRW4 184 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 SATB2Q9UPW6 733 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CLCA2Q9UQC9 943 aa18.87■□□□□ 0.61
CCM2-203ENST00000461377 CHST10O43529 356 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 ENTPD6O75354 484 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 PROS1P07225 676 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 CT62P0C5K7 136 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 ADORA3P0DMS8 318 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 MAP3K8P41279 467 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 MLLT10P55197 1068 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 STARD6P59095 220 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 DCST2Q5T1A1 773 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 CCNJQ5T5M9 372 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 OR8J1Q8NGP2 316 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 C9orf43Q8TAL5 461 aaPredicted RBP18.86■□□□□ 0.61
CCM2-203ENST00000461377 Q96MT0 163 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCM2-203ENST00000461377 ZNF232Q9UNY5 417 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 AGAP5A6NIR3 686 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 AP3D1O14617 1153 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 SRPX2O60687 465 aaPredicted RBP18.86■□□□□ 0.61
CCM2-203ENST00000461377 THBS1P07996 1170 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 RPS4Y1P22090 263 aaKnown RBP18.86■□□□□ 0.61
CCM2-203ENST00000461377 LIPAP38571 399 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 EEF1A1P68104 462 aaKnown RBP18.86■□□□□ 0.61
CCM2-203ENST00000461377 LARS2Q15031 903 aaKnown RBP18.86■□□□□ 0.61
CCM2-203ENST00000461377 TIGD6Q17RP2 521 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 C17orf82Q86X59 251 aaPredicted RBP18.86■□□□□ 0.61
CCM2-203ENST00000461377 ZNF619Q8N2I2 560 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 NDNFQ8TB73 568 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 GNPDA2Q8TDQ7 276 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 CRELD1Q96HD1 420 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 MAP3K3Q99759 626 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 SAP130Q9H0E3 1048 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 DOLKQ9UPQ8 538 aa18.86■□□□□ 0.61
CCM2-203ENST00000461377 CENPVL1A0A0U1RR11 272 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 PTHP01270 115 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 ADRA2AP08913 450 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 SLC35E2P0CK97 266 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 IFNA8P32881 189 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 IFNGR2P38484 337 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 HOXC5Q00444 222 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 EXOSC7Q15024 291 aaKnown RBP18.85■□□□□ 0.61
CCM2-203ENST00000461377 EIPR1Q53HC9 387 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 PLEKHM3Q6ZWE6 761 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 IQCF1Q8N6M8 205 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 TCTN2Q96GX1 697 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 MCHR1Q99705 422 aa18.85■□□□□ 0.61
CCM2-203ENST00000461377 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.85■□□□□ 0.61
CCM2-203ENST00000461377 STX11O75558 287 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 OR5F1O95221 314 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 MED26O95402 600 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 ALDH4A1P30038 563 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 VBP1P61758 197 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 LSM3P62310 102 aaKnown RBP18.84■□□□□ 0.61
CCM2-203ENST00000461377 CDK5Q00535 292 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 OCA2Q04671 838 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 GINS1Q14691 196 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 GPR68Q15743 365 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 OCLNQ16625 522 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 SYT16Q17RD7 645 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 COL13A1Q5TAT6 717 aaPredicted RBP18.84■□□□□ 0.61
CCM2-203ENST00000461377 PLAG1Q6DJT9 500 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 PRICKLE2Q7Z3G6 844 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 KIF18BQ86Y91 864 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 CROCCP3Q8IVE0 287 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 PIK3R3Q92569 461 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 SLC38A3Q99624 504 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 POLDIP3Q9BY77 421 aaKnown RBP18.84■□□□□ 0.61
CCM2-203ENST00000461377 DNAJC27Q9NZQ0 273 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 NTNG1Q9Y2I2 539 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 KIAA0513O60268 411 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 AK1P00568 194 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 THY1P04216 161 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms