RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KLK3P07288 261 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF888P0CJ79 500 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ADORA3P0DMS8 318 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 CFL1P23528 166 aaKnown RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 VAMP1P23763 118 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 LCN1P31025 176 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 DAPP51397 102 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 AKR1D1P51857 326 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PLCXD2Q0VAA5 305 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 SNTB2Q13425 540 aaKnown RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 C6orf132Q5T0Z8 1188 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 VRK3Q8IV63 474 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 MUL1Q969V5 352 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 HIST1H2AAQ96QV6 131 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 RXFP3Q9NSD7 469 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 KANTRA0A1W2PQU2 76 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 SEMA4FO95754 770 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PRKCAP17252 672 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PSMB5P28074 263 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 RPL6Q02878 288 aaKnown RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 TMEM69Q5SWH9 247 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 BAIAP2L2Q6UXY1 529 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 LMNTD1Q8N9Z9 388 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ADAMTS18Q8TE60 1221 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 GGHQ92820 318 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 OR4K3Q96R72 315 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ACSS1Q9NUB1 689 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 SCP2D1Q9UJQ7 156 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 CCL26Q9Y258 94 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 ENTPD2Q9Y5L3 495 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 OR2AT4A6NND4 320 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 SCO2O43819 266 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 RBBP9O75884 186 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 KCNK5O95279 499 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 TAP2Q03519 686 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PRDX1Q06830 199 aaKnown RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 HORMAD2Q8N7B1 307 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 TMEM246Q9BRR3 403 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 OR2B2Q9GZK3 357 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 TP63Q9H3D4 680 aaPredicted RBP13.95□□□□□ -0.18
PTPRU-205ENST00000460170 PTGES2Q9H7Z7 377 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 CSNK1G3Q9Y6M4 447 aa13.95□□□□□ -0.18
PTPRU-205ENST00000460170 KRBA1A5PL33 1030 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 FAM221BA6H8Z2 402 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 LRRTM2O43300 516 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 OR2B3O76000 313 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 SYPL1Q16563 259 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 WDR45BQ5MNZ6 344 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 SLC25A25Q6KCM7 469 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 SCGB3A2Q96PL1 93 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 OR6C2Q9NZP2 312 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 PTGER1P34995 402 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 EIF5AP63241 154 aaKnown RBP13.94□□□□□ -0.18
PTPRU-205ENST00000460170 KIR2DS3Q14952 304 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 PODNL1Q6PEZ8 512 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-205ENST00000460170 TMPRSS12Q86WS5 348 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 TOR1AIP2Q8NFQ8 470 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 OR13F1Q8NGS4 319 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 WDR20Q8TBZ3 569 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 NLKQ9UBE8 527 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 RAB3BP20337 219 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 RAB2AP61019 212 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 RAB40BQ12829 278 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 CHAF1BQ13112 559 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 NTRK2Q16620 822 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 Q6ZPB1 254 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-205ENST00000460170 OR6Q1Q8NGQ2 317 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 CREB3L4Q8TEY5 395 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 NUDT15Q9NV35 164 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 KLHL21Q9UJP4 597 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 NOP16Q9Y3C1 178 aaKnown RBP13.94□□□□□ -0.18
PTPRU-205ENST00000460170 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 LAMB2P55268 1798 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 CLDN24A6NM45 220 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 ANXA3P12429 323 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 IL7P13232 177 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 CR2P20023 1033 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 PLCZ1Q86YW0 608 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 ACOT11Q8WXI4 607 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-205ENST00000460170 SAP130Q9H0E3 1048 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 HCFC2Q9Y5Z7 792 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 J3KTA2 159 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 HEXBP07686 556 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 PGCP20142 388 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 RABIFP47224 123 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 ZNF81P51508 661 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 SGCBQ16585 318 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 DEFB110Q30KQ9 67 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 ZIC5Q96T25 663 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 PAQR5Q9NXK6 330 aaPredicted RBP13.94□□□□□ -0.18
PTPRU-205ENST00000460170 B3GNT3Q9Y2A9 372 aa13.94□□□□□ -0.18
PTPRU-205ENST00000460170 RBMXL2O75526 392 aaKnown RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 HCKP08631 526 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 THEGLP0DJG4 465 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 IRF4Q15306 451 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 PUS10Q3MIT2 529 aaKnown RBP13.93□□□□□ -0.18
PTPRU-205ENST00000460170 ALKBH2Q6NS38 261 aa13.93□□□□□ -0.18
PTPRU-205ENST00000460170 LRRN1Q6UXK5 716 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms