RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 WIF1Q9Y5W5 379 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 FAM221BA6H8Z2 402 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 H3BSA7 217 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CREG1O75629 220 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ALDOAP04075 364 aaKnown RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SLC25A6P12236 298 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 MFGE8Q08431 387 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF486Q96H40 463 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 AGO4Q9HCK5 861 aaKnown RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 PIGVQ9NUD9 493 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ARHGAP33O14559 1287 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 OR2C1O95371 312 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 DEFA4P12838 97 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PRAMEF18Q5VWM3 479 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SPATC1Q76KD6 591 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 C2orf73Q8N5S3 287 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 BOLLQ8N9W6 283 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 HERPUD2Q9BSE4 406 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 DDX4Q9NQI0 724 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SLC17A7Q9P2U7 560 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PCDHB10Q9UN67 800 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF256Q9Y2P7 627 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 NCANO14594 1321 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ARAP3Q8WWN8 1544 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 A0A1W2PP18 115 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 OR6C75A6NL08 312 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SYPP08247 313 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 DNAJB1P25685 340 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 IL3RAP26951 378 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 RPL11P62913 178 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 FAM124AQ86V42 546 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PHF13Q86YI8 300 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TEX26Q8N6G2 289 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 OR8J1Q8NGP2 316 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ADARB2Q9NS39 739 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TM7SF3Q9NS93 570 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 HPRP00739 348 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ITGB2P05107 769 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CDK4P11802 303 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 INSRRP14616 1297 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ELK4P28324 431 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 EIF2DP41214 584 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 GRM5P41594 1212 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TEKQ02763 1124 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 GTF3C1Q12789 2109 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 LYSMD4Q5XG99 296 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 NSUN4Q96CB9 384 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 FCRL3Q96P31 734 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 HCAR1Q9BXC0 346 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SLC12A9Q9BXP2 914 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 RASD1Q9Y272 281 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CDHR4A6H8M9 788 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 BCAS2O75934 225 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TNFP01375 233 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 EPHX1P07099 455 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ADORA3P0DMS8 318 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 EDNRBP24530 442 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 L1CAMP32004 1257 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ETV4P43268 484 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TCTAP57738 103 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TRIM61Q5EBN2 209 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 STEAP2Q8NFT2 490 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TOMM40LQ969M1 308 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ZUFSPQ96AP4 578 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CCM2Q9BSQ5 444 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM134Q9H6X4 195 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PLB1Q6P1J6 1458 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 IQCF5A8MTL0 148 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 KIAA0513O60268 411 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SULT1C4O75897 302 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CNTN5O94779 1100 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PFKMP08237 780 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 OGFOD3Q6PK18 319 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 GPC2Q8N158 579 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PGBD5Q8N414 524 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF417Q8TAU3 575 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 VAMP8Q9BV40 100 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 NLKQ9UBE8 527 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 LOC102725191A0A1B0GVB3 256 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 NUPL2O15504 423 aaKnown RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 EPOP01588 193 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 VIPR1P32241 457 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 UBE2G1P62253 170 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SLC7A9P82251 487 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 RAB32Q13637 225 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 PRAMEF14Q5SWL7 426 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ABLIM2Q6H8Q1 611 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM220Q6QAJ8 160 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ASRGL1Q7L266 308 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 FAM71AQ8IYT1 594 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 OR4M1Q8NGD0 313 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF582Q96NG8 517 aaPredicted RBP8.53□□□□□ -1.04
NIPBL-202ENST00000448238 SLC29A3Q9BZD2 475 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CPNE7Q9UBL6 633 aa8.53□□□□□ -1.04
NIPBL-202ENST00000448238 CDC42BPGQ6DT37 1551 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms