RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CD300EQ496F6 205 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 SUSD1Q6UWL2 747 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF788Q6ZQV5 615 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 CARM1Q86X55 608 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 PLD3Q8IV08 490 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 TBC1D21Q8IYX1 336 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 LINC00301Q8NCQ3 95 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 B3GNT7Q8NFL0 401 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 TMX3Q96JJ7 454 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 SGCZQ96LD1 299 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 TRIB3Q96RU7 358 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 VRK1Q99986 396 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 DPH7Q9BTV6 452 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 XPO4Q9C0E2 1151 aaKnown RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 POLR1EQ9GZS1 481 aaKnown RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 IQCGQ9H095 443 aaKnown RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 G6PC2Q9NQR9 355 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 NECTIN3Q9NQS3 549 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 PNO1Q9NRX1 252 aaKnown RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 ETNK2Q9NVF9 386 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 SMOXQ9NWM0 555 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 CPSF2Q9P2I0 782 aaKnown RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 KLHL42Q9P2K6 505 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 SLC17A6Q9P2U8 582 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 POLG2Q9UHN1 485 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 FBXO9Q9UK97 447 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 GRID1Q9ULK0 1009 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 RABL2BQ9UNT1 228 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 FKBP7Q9Y680 259 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 SPACA6W5XKT8 324 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 MUC4Q99102 2169 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 MED12LQ86YW9 2145 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OR2A25A4D2G3 310 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 KRT87PA6NCN2 255 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 H0YC42 278 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 H0YIG0 161 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 H0YL77 283 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 GPC4O75487 556 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CLPXO76031 633 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 NTN1O95631 604 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 AP2A1O95782 977 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CYP1A2P05177 515 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CRYBA1P05813 215 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CCDC175P0C221 793 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CA4P22748 312 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 GIFP27352 417 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 PPP2R1BP30154 601 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 PRLHRP49683 370 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 GPR143P51810 404 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 AIF1P55008 147 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 HNRNPH2P55795 449 aaKnown RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 RWDD2BP57060 319 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OLR1P78380 273 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 SPOCK1Q08629 439 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 FAM53BQ14153 422 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 SEMA3AQ14563 771 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 P2RY6Q15077 328 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 NAA35Q5VZE5 725 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ZDHHC20Q5W0Z9 365 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 PGBD2Q6P3X8 592 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF793Q6ZN11 406 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CYP4V2Q6ZWL3 525 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ENOSF1Q7L5Y1 443 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 PDSS2Q86YH6 399 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ANKRD13BQ86YJ7 626 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 MYLK4Q86YV6 388 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 HSCBQ8IWL3 235 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 PIANPQ8IYJ0 282 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF321PQ8N8H1 164 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OR2L3Q8NG85 312 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OR51F2Q8NH61 342 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OR5K2Q8NHB8 316 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 LINC01006Q8NI28 216 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF398Q8TD17 642 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 DTX3LQ8TDB6 740 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 NSMCE1Q8WV22 266 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 SLC22A18Q96BI1 424 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 FBXO17Q96EF6 278 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 THOC1Q96FV9 657 aaKnown RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 MRGPRX4Q96LA9 322 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OR2A5Q96R48 311 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 PEBP4Q96S96 227 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 CCDC77Q9BR77 488 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 TRMOQ9BU70 441 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 DOHHQ9BU89 302 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 SELENOOQ9BVL4 669 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 ACAT2Q9BWD1 397 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 DHX35Q9H5Z1 703 aaKnown RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 DENND2DQ9H6A0 471 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 MAGEE1Q9HCI5 957 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 MRPS18AQ9NVS2 196 aaKnown RBP4.28□□□□□ -1.72
SDCBP-205ENST00000447267 MYO1AQ9UBC5 1043 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 OPN4Q9UHM6 478 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 POU2F3Q9UKI9 436 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 KLK4Q9Y5K2 254 aa4.28□□□□□ -1.72
SDCBP-205ENST00000447267 GLYATL1P3A0A0U1RQE8 302 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 SLC22A20A6NK97 555 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CLDN34H7C241 214 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 PRPSAP2O60256 369 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms