RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PODNL1Q6PEZ8 512 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 COX18Q8N8Q8 333 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 SIMC1Q8NDZ2 872 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 UBE2FQ969M7 185 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 C12orf43Q96C57 262 aaKnown RBP17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 AHCYL2Q96HN2 611 aaKnown RBP17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 MAN2C1Q9NTJ4 1040 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 ZNF226Q9NYT6 803 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 CDC14AQ9UNH5 594 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 PCDHGA10Q9Y5H3 936 aa17.6■□□□□ 0.41
SEMA3D-202ENST00000444867 ZNF99A8MXY4 864 aaPredicted RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 H0YIG0 161 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 CLDN4O14493 209 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 AP3D1O14617 1153 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 NME6O75414 186 aaPredicted RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 STX11O75558 287 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 MED26O95402 600 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 DBIP07108 87 aaKnown RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 GUSBP08236 651 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 GABRB1P18505 474 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 RPS4Y1P22090 263 aaKnown RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 GPR3P46089 330 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 IDH2P48735 452 aaKnown RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 TAS2R41P59536 307 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 PIGFQ07326 219 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 BIKQ13323 160 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 GRM7Q14831 915 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 TRAM2Q15035 370 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 SMN1Q16637 294 aaKnown RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 DCST2Q5T1A1 773 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 HMGN2P46Q86SG4 172 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 VWA5B2Q8N398 1253 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 MORN4Q8NDC4 146 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 SLC38A4Q969I6 547 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 ZG16BQ96DA0 208 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 SIGLEC11Q96RL6 698 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 POLR2J2Q9GZM3 115 aaKnown RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 POLR2J3Q9H1A7 115 aaKnown RBP17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 EVA1AQ9H8M9 152 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 HCN3Q9P1Z3 774 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 AASSQ9UDR5 926 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 NDOR1Q9UHB4 597 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 MKLN1Q9UL63 735 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 CHST2Q9Y4C5 530 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 KNL1Q8NG31 2342 aa17.59■□□□□ 0.41
SEMA3D-202ENST00000444867 SH3D21A4FU49 640 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 TRIM64BA6NI03 449 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 AGAP5A6NIR3 686 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 NKX2-2O95096 273 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 CT62P0C5K7 136 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 CCNYL3P0C7X3 344 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 IFNGR2P38484 337 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 CTSKP43235 329 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 RGS8P57771 180 aaPredicted RBP17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 EMX1Q04741 257 aaPredicted RBP17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 DMWDQ09019 674 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 ST3GAL3Q11203 375 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 STX4Q12846 297 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 SLC13A2Q13183 592 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 NR1D2Q14995 579 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 C1orf94Q6P1W5 598 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 PLXDC1Q8IUK5 500 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 GALNT12Q8IXK2 581 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 TOR1AIP2Q8NFQ8 470 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 OR4K5Q8NGD3 323 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 ZNF578Q96N58 590 aaPredicted RBP17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 PRTFDC1Q9NRG1 225 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 IRAK4Q9NWZ3 460 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 PSORS1C1Q9UIG5 152 aa17.58■□□□□ 0.41
SEMA3D-202ENST00000444867 IGHV1OR21-1A0A087WYE8 117 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 A0A1B0GVT2 93 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 H3BMQ9 156 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 HRO43593 1189 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 DUX1O43812 170 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 KIAA0513O60268 411 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 CYP7B1O75881 506 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 CBX7O95931 251 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 GLB1P16278 677 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 GSTM3P21266 225 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 PCSK6P29122 969 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 ALDH4A1P30038 563 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 GSSP48637 474 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 EEF1A1P68104 462 aaKnown RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 POU6F2P78424 691 aaPredicted RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 GPLD1P80108 840 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 TARDBPQ13148 414 aaKnown RBP eCLIP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 EXOSC7Q15024 291 aaKnown RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 SLX4IPQ5VYV7 408 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 SHISA5Q8N114 240 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 RAB2BQ8WUD1 216 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 FAR1Q8WVX9 515 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 RORBQ92753 470 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 DIO2Q92813 273 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 MYDGFQ969H8 173 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 PEX11GQ96HA9 241 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 COG8Q96MW5 612 aa17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 NECAB3Q96P71 396 aaPredicted RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 PELOQ9BRX2 385 aaKnown RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 LMF2Q9BU23 707 aaKnown RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 FKBP14Q9NWM8 211 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms