RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MOAP1Q96BY2 351 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 MVB12AQ96EY5 273 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 RMND5BQ96G75 393 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM121BQ9BXQ6 578 aaPredicted RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 C3orf14Q9HBI5 128 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 V9GYQ6 96 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 GPR179Q6PRD1 2367 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 PRR33A8MZF0 331 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 H0YIG0 161 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 FLRT2O43155 660 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 FHP07954 510 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 BMP2P12643 396 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 PPP2R1BP30154 601 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 PCGF2P35227 344 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 PRR5P85299 388 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 ACY1Q03154 408 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 MRPL28Q13084 256 aaKnown RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 FAM98BQ52LJ0 330 aaKnown RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM107Q6UX40 140 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 CEACAM20Q6UY09 585 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TTLL10Q6ZVT0 673 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 CDH26Q8IXH8 852 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 EID3Q8N140 333 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 OR56A1Q8NGH5 318 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 OR9A2Q8NGT5 310 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 FBXO30Q8TB52 745 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 MAL2Q969L2 176 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 NRBF2Q96F24 287 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 MAGED4Q96JG8 741 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 GFM1Q96RP9 751 aaKnown RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 SEPHS2Q99611 448 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 NDC1Q9BTX1 674 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 UGT2B28Q9BY64 529 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM38AQ9H6F2 299 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 CXorf21Q9HAI6 301 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 DCAF13Q9NV06 445 aaKnown RBP7.57□□□□□ -1.2
CCDC39-201ENST00000442201 NDOR1Q9UHB4 597 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 PCDHGA10Q9Y5H3 936 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 CROCCQ5TZA2 2017 aa7.57□□□□□ -1.2
CCDC39-201ENST00000442201 IGHV5-10-1A0A0J9YXX1 117 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 A0A0X1KG70 313 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 H3BMH7 237 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TOR1AO14656 332 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 EMC8O43402 210 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 FGF17O60258 216 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 LDB3O75112 727 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 LDOC1O95751 146 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 SERPINA1P01009 418 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CPMP14384 443 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF26P17031 533 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CKMT2P17540 419 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ALAS2P22557 587 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 KDELR2P33947 212 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PTGER1P34995 402 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ANXA11P50995 505 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PRKAG1P54619 331 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ARSFP54793 590 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ID2Q02363 134 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RELQ04864 619 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CHRNB3Q05901 458 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF630Q2M218 657 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 YIF1BQ5BJH7 314 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 INTS11Q5TA45 600 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TNFAIP8L2Q6P589 184 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ISLR2Q6UXK2 745 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 FKBP9P1Q75LS8 142 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM52Q8NDY8 209 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RHBDD1Q8TEB9 315 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 MARC2Q969Z3 335 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TBC1D20Q96BZ9 403 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF501Q96CX3 271 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ELP4Q96EB1 424 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PEX11GQ96HA9 241 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 SLC35G5Q96KT7 338 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PKP2Q99959 881 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 WACQ9BTA9 647 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ANKRD60Q9BZ19 345 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 HMG20AQ9NP66 347 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 MRPL39Q9NYK5 338 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF175Q9Y473 711 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PCDH15Q96QU1 1955 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ASXL3Q9C0F0 2248 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 BLACEA4D250 179 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CLDN4O14493 209 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TPST1O60507 370 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 B4GALT2O60909 372 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TIPRLO75663 272 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 FCGR1AP12314 374 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 MC3RP41968 323 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RPS26P62854 115 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 MAT1AQ00266 395 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CDK6Q00534 326 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 SCARB2Q14108 478 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 YOD1Q5VVQ6 348 aaPredicted RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 BTLAQ7Z6A9 289 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ARMC8Q8IUR7 673 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF595Q8IYB9 648 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 METTL27Q8N6F8 245 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms