RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PPP1R8Q12972 351 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 TOP3AQ13472 1001 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNHIT3Q15649 155 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ATP1A1-AS1Q5TC04 95 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 YOD1Q5VVQ6 348 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 GARNL3Q5VVW2 1013 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF574Q6ZN55 896 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 CBLL1Q75N03 491 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 VPS37AQ8NEZ2 397 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR8J2Q8NGG1 315 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR5M3Q8NGP4 307 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 EGLN2Q96KS0 407 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM60AQ9NP50 221 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC13A4Q9UKG4 626 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 PCDHGA3Q9Y5H0 932 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ATP6V1G1O75348 118 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 GIMD1P0DJR0 217 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 CD46P15529 392 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 IMPA1P29218 277 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 NTSP30990 170 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 UGT2B10P36537 528 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAP2K4P45985 399 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 CHRNB3Q05901 458 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZFP36L1Q07352 338 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 TMED1Q13445 227 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ATP1A4Q13733 1029 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 SMN1Q16637 294 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 PAPD4Q6PIY7 484 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 LCTLQ6UWM7 567 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 NUDT13Q86X67 352 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 LACC1Q8IV20 430 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ENTHD1Q8IYW4 607 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR10Q1Q8NGQ4 319 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR1N1Q8NGS0 311 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 FBXO30Q8TB52 745 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 UBE2FQ969M7 185 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 TP53INP1Q96A56 240 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 APIPQ96GX9 242 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR2A14Q96R47 310 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 F2RL3Q96RI0 385 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 NODALQ96S42 347 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 LRTM1Q9HBL6 345 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 C14orf105Q9NVL8 296 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 AP3M1Q9Y2T2 418 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 MRPS2Q9Y399 296 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 LOC101059948A0A1B0GTJ6 334 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 TRAPPC6AO75865 159 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF888P0CJ79 500 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ABOP16442 354 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 TCEA1P23193 301 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF267Q14586 743 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRSS53Q2L4Q9 553 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 LRRC70Q7Z2Q7 622 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 CCDC103Q8IW40 242 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 EID3Q8N140 333 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 FIG4Q92562 907 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 POP5Q969H6 163 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 NEIL2Q969S2 332 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 SCARF2Q96GP6 870 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 HRASLS5Q96KN8 279 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ART5Q96L15 291 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 RAD21L1Q9H4I0 556 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 TBC1D23Q9NUY8 699 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 PHF11Q9UIL8 331 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF490Q9ULM2 529 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 RUVBL1Q9Y265 456 aaKnown RBP6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAP4K5Q9Y4K4 846 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 SNX8Q9Y5X2 465 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 XIRP2A4UGR9 3374 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 LOC105369274A0A096LPK9 316 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 LOC102723532A0A0G2JNH3 316 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRR19A6NJB7 356 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 RTCAO00442 366 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 HAT1O14929 419 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 RGS14O43566 566 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 PTX3P26022 381 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 NRG3P56975 720 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 PLIN5Q00G26 463 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 DOC2AQ14183 400 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SSPNQ14714 243 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 NR1D2Q14995 579 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 HIPK1Q86Z02 1210 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SNX29P2Q8IUI4 249 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR4N4Q8N0Y3 316 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 TMEM132CQ8N3T6 1108 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 GALNT16Q8N428 558 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 GOT1L1Q8NHS2 421 aaPredicted RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRR7Q8TB68 274 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC41A2Q96JW4 573 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ARPC5LQ9BPX5 153 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 UTP23Q9BRU9 249 aaKnown RBP6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC25A18Q9H1K4 315 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 TOR4AQ9NXH8 423 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ANKRD10Q9NXR5 420 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 ATG2AQ2TAZ0 1938 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 CREBBPQ92793 2442 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 DOCK9Q9BZ29 2069 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 IGHV3-20A0A0C4DH32 117 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 SYNDIG1LA6NDD5 238 aa6.9□□□□□ -1.3
CDC42BPA-208ENST00000442054 A8MVJ9 347 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms