RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 EFR3AQ14156 821 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 CYP27C1Q4G0S4 372 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 EMC4Q5J8M3 183 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 CPTPQ5TA50 214 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 RPTNQ6XPR3 784 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 NCCRP1Q6ZVX7 275 aaPredicted RBP21.62■■□□□ 1.05
VARS-217ENST00000440048 RIMKLAQ8IXN7 391 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 EFHD2Q96C19 240 aaPredicted RBP21.62■■□□□ 1.05
VARS-217ENST00000440048 TMCO6Q96DC7 493 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 DMRTA2Q96SC8 542 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 VKORC1Q9BQB6 163 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 LMF2Q9BU23 707 aaKnown RBP21.62■■□□□ 1.05
VARS-217ENST00000440048 SLC6A15Q9H2J7 730 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 UBQLN3Q9H347 655 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 EXO5Q9H790 373 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 GALNT9Q9HCQ5 603 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 ACKR4Q9NPB9 350 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 EQTNQ9NQ60 294 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 THAP1Q9NVV9 213 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 KLRF1Q9NZS2 232 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 NTMQ9P121 344 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 C15orf41Q9Y2V0 281 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 C2orf72A6NCS6 295 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 ENDOUP21128 410 aaKnown RBP21.61■■□□□ 1.05
VARS-217ENST00000440048 PNLIPRP2P54317 469 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 PRKAG1P54619 331 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 MLC1Q15049 377 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 ZNHIT3Q15649 155 aaPredicted RBP21.61■■□□□ 1.05
VARS-217ENST00000440048 TIGD3Q6B0B8 471 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 ANGPTL8Q6UXH0 198 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 MRGPRGQ86SM5 289 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 ZNF808Q8N4W9 903 aaPredicted RBP21.61■■□□□ 1.05
VARS-217ENST00000440048 NUP43Q8NFH3 380 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 CEP70Q8NHQ1 597 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 RAB3IL1Q8TBN0 382 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 COQ8BQ96D53 544 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 ATAD3AQ9NVI7 634 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 SPRR3Q9UBC9 169 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 TNFRSF10DQ9UBN6 386 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 CBLCQ9ULV8 474 aa21.61■■□□□ 1.05
VARS-217ENST00000440048 A0A1W2PRB8 838 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 BCKDKO14874 412 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 EMC8O43402 210 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 ELAVL4P26378 380 aaKnown RBP21.6■■□□□ 1.05
VARS-217ENST00000440048 TRPC1P48995 793 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 DIO3P55073 304 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 CLDN8P56748 225 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 C21orf58P58505 322 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 GXYLT1Q4G148 440 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 ATG16L1Q676U5 607 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 TRIM42Q8IWZ5 723 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 EID3Q8N140 333 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 OR5M9Q8NGP3 310 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 OR1J4Q8NGS1 313 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 PHF10Q8WUB8 498 aaKnown RBP21.6■■□□□ 1.05
VARS-217ENST00000440048 PRPF18Q99633 342 aaKnown RBP21.6■■□□□ 1.05
VARS-217ENST00000440048 TP63Q9H3D4 680 aaPredicted RBP21.6■■□□□ 1.05
VARS-217ENST00000440048 MANSC1Q9H8J5 431 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 MEAF6Q9HAF1 191 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 C3orf14Q9HBI5 128 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 Q9N2J8 555 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 PNPLA3Q9NST1 481 aa21.6■■□□□ 1.05
VARS-217ENST00000440048 SIRT3Q9NTG7 399 aaPredicted RBP21.6■■□□□ 1.05
VARS-217ENST00000440048 PHF3Q92576 2039 aaKnown RBP21.6■■□□□ 1.05
VARS-217ENST00000440048 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 TTC36A6NLP5 189 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 SNPHO15079 494 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 TRAPPC6AO75865 159 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 CYP4B1P13584 511 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 H2AFXP16104 143 aaPredicted RBP21.59■■□□□ 1.05
VARS-217ENST00000440048 COL8A1P27658 744 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 PTPN6P29350 595 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 GABRA3P34903 492 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 MAP3K8P41279 467 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 SMSP52788 366 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 MRPS22P82650 360 aaKnown RBP21.59■■□□□ 1.05
VARS-217ENST00000440048 SZRD1Q7Z422 152 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 NATD1Q8N6N6 113 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 NEIL3Q8TAT5 605 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 RNF138Q8WVD3 245 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 OR5P2Q8WZ92 322 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 HOXB13Q92826 284 aaPredicted RBP21.59■■□□□ 1.05
VARS-217ENST00000440048 SARAFQ96BY9 339 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 GIMAP5Q96F15 307 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 ACAD8Q9UKU7 415 aa21.59■■□□□ 1.05
VARS-217ENST00000440048 GXYLT2A0PJZ3 443 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 HPNP05981 417 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 LBPP18428 481 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 DECR1Q16698 335 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 HDXQ7Z353 690 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 LRRC34Q8IZ02 419 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 CDRT4Q8N9R6 151 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 WDSUB1Q8N9V3 476 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 FAM120BQ96EK7 910 aaKnown RBP21.58■■□□□ 1.05
VARS-217ENST00000440048 ATP6V1G3Q96LB4 118 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 MS4A4EQ96PG1 132 aa21.58■■□□□ 1.05
VARS-217ENST00000440048 BHLHE41Q9C0J9 482 aaPredicted RBP21.58■■□□□ 1.05
VARS-217ENST00000440048 ARGLU1Q9NWB6 273 aaPredicted RBP21.58■■□□□ 1.05
VARS-217ENST00000440048 MARCOQ9UEW3 520 aaPredicted RBP21.58■■□□□ 1.05
VARS-217ENST00000440048 MAPRE3Q9UPY8 281 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms