RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C20orf27Q9GZN8 174 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 UBQLN3Q9H347 655 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 C3orf14Q9HBI5 128 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 COQ3Q9NZJ6 369 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 NOP53Q9NZM5 478 aaKnown RBP22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 MAPRE3Q9UPY8 281 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 GNB5O14775 395 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 SNPHO15079 494 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 TRAPPC6AO75865 159 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 CDK9P50750 372 aaKnown RBP22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 PSMD4P55036 377 aaKnown RBP22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 BST1Q10588 318 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 DECR1Q16698 335 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 VPS26BQ4G0F5 336 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 EMC4Q5J8M3 183 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 CPTPQ5TA50 214 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 HIST2H2BCQ6DN03 193 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 ANGPTL8Q6UXH0 198 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 TLCD1Q96CP7 247 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 LMF2Q9BU23 707 aaKnown RBP22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 GALNT9Q9HCQ5 603 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 PNPLA3Q9NST1 481 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 ASIC5Q9NY37 505 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 CBLCQ9ULV8 474 aa22.61■■□□□ 1.21
RAPGEF1-206ENST00000438647 PRSS44E7EML9 344 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 WDR1O75083 606 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 HPNP05981 417 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 PTGDSP41222 190 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 WDR4P57081 412 aaKnown RBP22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 PRR5P85299 388 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 TOMM20Q15388 145 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 ZNF585AQ6P3V2 769 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 SZRD1Q7Z422 152 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 OR4N2Q8NGD1 307 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 OR5M9Q8NGP3 310 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 MGARPQ8TDB4 240 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 EFHD2Q96C19 240 aaPredicted RBP22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 MS4A4EQ96PG1 132 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 SLC6A15Q9H2J7 730 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 NTMQ9P121 344 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 PCDHGB3Q9Y5G1 929 aa22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 NCOA6Q14686 2063 aaPredicted RBP22.6■■□□□ 1.21
RAPGEF1-206ENST00000438647 HOXD4P09016 255 aaPredicted RBP22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 ENDOUP21128 410 aaKnown RBP22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 ACVR2AP27037 513 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 COL8A1P27658 744 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 PTPN6P29350 595 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 TRPC1P48995 793 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 ACAD11Q709F0 780 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 TRIM42Q8IWZ5 723 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 LRRC34Q8IZ02 419 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 CDRT4Q8N9R6 151 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 NUP43Q8NFH3 380 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 OR7A2PQ8NGA2 310 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 RAB3IL1Q8TBN0 382 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 PPP1R36Q96LQ0 422 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 AKTIPQ9H8T0 292 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 EQTNQ9NQ60 294 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 THAP1Q9NVV9 213 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 SPRR3Q9UBC9 169 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 TNFRSF10DQ9UBN6 386 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 HRH3Q9Y5N1 445 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 WIF1Q9Y5W5 379 aa22.59■■□□□ 1.21
RAPGEF1-206ENST00000438647 C15orf38-AP3S2A0A0A6YYH1 394 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 A0A1W2PRB8 838 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 EMC8O43402 210 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 CBR3O75828 277 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 KCNH1O95259 989 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 CLDN14O95500 239 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 LAMP1P11279 417 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 G6PDP11413 515 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 GABRA1P14867 456 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 PRKAG1P54619 331 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 C21orf58P58505 322 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 GAB1Q13480 694 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 ATG16L1Q676U5 607 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 NCCRP1Q6ZVX7 275 aaPredicted RBP22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 RND1Q92730 232 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 CHST11Q9NPF2 352 aa22.58■■□□□ 1.21
RAPGEF1-206ENST00000438647 GABRA3P34903 492 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 GCKP35557 465 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 LSM12Q3MHD2 195 aaKnown RBP22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 AGBL2Q5U5Z8 902 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 ZCCHC12Q6PEW1 402 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 B3GNT6Q6ZMB0 384 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 WDR53Q7Z5U6 358 aaPredicted RBP22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 PLCZ1Q86YW0 608 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 KRTCAP2Q8N6L1 136 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 RNF138Q8WVD3 245 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 OR5P2Q8WZ92 322 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 HOXB13Q92826 284 aaPredicted RBP22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 SDCCAG3Q96C92 435 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 COQ8BQ96D53 544 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 NUF2Q9BZD4 464 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 BHLHE41Q9C0J9 482 aaPredicted RBP22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 NEUROD4Q9HD90 331 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 ABCG2Q9UNQ0 655 aa22.57■■□□□ 1.2
RAPGEF1-206ENST00000438647 C2orf72A6NCS6 295 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 IL33O95760 270 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 CYP4B1P13584 511 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms