RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 MS4A8Q9BY19 250 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 TMPRSS11EQ9UL52 423 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 OR6A2O95222 327 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EFEMP2O95967 443 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 PGCP20142 388 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CD82P27701 267 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CRABP1P29762 137 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 XCR1P46094 333 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 CCR9P51686 369 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SEMG2Q02383 582 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 RALGDSQ12967 914 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 GK2Q14410 553 aaPredicted RBP3.56□□□□□ -1.84
SHPRH-205ENST00000433355 SYVN1Q86TM6 617 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 FAM185AQ8N0U4 392 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MED28Q9H204 178 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 COQ10BQ9H8M1 238 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MAT2BQ9NZL9 334 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 MUTYHQ9UIF7 546 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 UTS2RQ9UKP6 389 aa3.56□□□□□ -1.84
SHPRH-205ENST00000433355 EIF1BO60739 113 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ELK4P28324 431 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RGS19P49795 217 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DIO3P55073 304 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TSTA3Q13630 321 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RAB39AQ14964 217 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NEDD8Q15843 81 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FAM71E1Q6IPT2 247 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 LSMEM2Q8N112 164 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC22A8Q8TCC7 542 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RELTQ969Z4 430 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 KLHL32Q96NJ5 620 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GOLGA2P5Q9HBQ8 144 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NUMBLQ9Y6R0 609 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DSPPQ9NZW4 1301 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 DOCK10Q96BY6 2186 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RGS5O15539 181 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GJB3O75712 270 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 RGS9O75916 674 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ISL1P61371 349 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 POU6F2P78424 691 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ACY1Q03154 408 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SPHARQ15513 63 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ARL9Q6T311 187 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CDC26Q8NHZ8 85 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SHKBP1Q8TBC3 707 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 C12orf43Q96C57 262 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 KLHL15Q96M94 604 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NPAS2Q99743 824 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GABRG3Q99928 467 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 POLD4Q9HCU8 107 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 C11orf16Q9NQ32 467 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GHRLQ9UBU3 117 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ERVK-19Q9WJR5 959 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SONP18583 2426 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 OR2A25A4D2G3 310 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NCF1BA6NI72 391 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NCF1CA8MVU1 366 aaPredicted RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FAM72CH0Y354 149 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SNPHO15079 494 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TNFSF14O43557 240 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 OR10H2O60403 315 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TPST1O60507 370 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 C6P13671 934 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FSHRP23945 695 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GRK6P43250 576 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 HSPA7P48741 367 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NCBP2P52298 156 aaKnown RBP eCLIP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 IRF9Q00978 393 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TRA2AQ13595 282 aaKnown RBP eCLIP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NRF1Q16656 503 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FAM72AQ5TYM5 149 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CLEC6AQ6EIG7 209 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FAM72DQ6L9T8 149 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 AADACL2Q6P093 401 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FIP1L1Q6UN15 594 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 FAM72BQ86X60 149 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MRPL43Q8N983 215 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TSTD1Q8NFU3 115 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CADM4Q8NFZ8 388 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NT5CQ8TCD5 201 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NETO1Q8TDF5 533 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZFYVE21Q9BQ24 234 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SERINC1Q9NRX5 453 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF337Q9Y3M9 751 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 A0A0J9YY10 115 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 J3KR12 359 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 NSA2O95478 260 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GPR75O95800 540 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 GP1BAP07359 652 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SEC61A1P61619 476 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 CRTC1Q6UUV9 634 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF852Q6ZMS4 543 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 MAMSTRQ6ZN01 415 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 TTLL10Q6ZVT0 673 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 BHLHA9Q7RTU4 235 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 EDAQ92838 391 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 PTERQ96BW5 349 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 ADAD1Q96M93 576 aaKnown RBP3.55□□□□□ -1.84
SHPRH-205ENST00000433355 COQ10AQ96MF6 247 aa3.55□□□□□ -1.84
SHPRH-205ENST00000433355 SLC46A1Q96NT5 459 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms