RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 APH1BQ8WW43 257 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 CTHRC1Q96CG8 243 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 NECAB3Q96P71 396 aaPredicted RBP15.54■□□□□ 0.08
USHBP1-203ENST00000431146 ALOXE3Q9BYJ1 711 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 CCDC90BQ9GZT6 254 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 RAB33BQ9H082 229 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 ERVMER34-1Q9H9K5 563 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 MAN2C1Q9NTJ4 1040 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 SLC13A4Q9UKG4 626 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 TECTAO75443 2155 aa15.54■□□□□ 0.08
USHBP1-203ENST00000431146 TNRC6BQ9UPQ9 1833 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 GXYLT2A0PJZ3 443 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CPSF4LA6NMK7 179 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 DUX1O43812 170 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 WBP4O75554 376 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 SOX14O95416 240 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ALOX5P09917 674 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ALAS2P22557 587 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 KRT20P35900 424 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 GGT2P36268 569 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 RFX3P48380 749 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ARRB1P49407 418 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ARL4DP49703 201 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ZNF155Q12901 538 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 DCST2Q5T1A1 773 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 PMS2CLQ68D20 193 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 XAF1Q6GPH4 301 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 PODNL1Q6PEZ8 512 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 TTLL10Q6ZVT0 673 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 MEX3DQ86XN8 651 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 COX18Q8N8Q8 333 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 OR51Q1Q8NH59 317 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 PSD2Q9BQI7 771 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CXorf21Q9HAI6 301 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 PRTFDC1Q9NRG1 225 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 HSPE1-MOB4S4R3N1 261 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 OR2B3O76000 313 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 AGR2O95994 175 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CD1CP29017 333 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 SSTR4P31391 388 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 GABRA3P34903 492 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 TOP3AQ13472 1001 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 PTGES3Q15185 160 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 MAPK14Q16539 360 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 TCTE1Q5JU00 501 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 BORAQ6PGQ7 559 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CLVS1Q8IUQ0 354 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 GALNT12Q8IXK2 581 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CDRT4Q8N9R6 151 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 OR6C4Q8NGE1 309 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 RBM18Q96H35 190 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 NUDT22Q9BRQ3 303 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 FUZQ9BT04 418 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 MTHFD2LQ9H903 347 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ERVK-18Q9QC07 812 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 DHCR7Q9UBM7 475 aaKnown RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 NDOR1Q9UHB4 597 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CDC14AQ9UNH5 594 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 ZNF443Q9Y2A4 671 aaPredicted RBP15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CLDN16Q9Y5I7 305 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 CSNK1G3Q9Y6M4 447 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 WDFY3Q8IZQ1 3526 aa15.53■□□□□ 0.08
USHBP1-203ENST00000431146 SH3PXD2BA1X283 911 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 FAAHO00519 579 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 PEX12O00623 359 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 CCDC159P0C7I6 412 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 GNSP15586 552 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 S1PR1P21453 382 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 TRHRP34981 398 aaPredicted RBP15.52■□□□□ 0.08
USHBP1-203ENST00000431146 OR1D4P47884 311 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 GABARAPL2P60520 117 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 SKP1P63208 163 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 HSD11B2P80365 405 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 TARDBPQ13148 414 aaKnown RBP eCLIP15.52■□□□□ 0.08
USHBP1-203ENST00000431146 ZBED5Q49AG3 693 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 PRPF38BQ5VTL8 546 aaKnown RBP15.52■□□□□ 0.08
USHBP1-203ENST00000431146 ZNF836Q6ZNA1 936 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 PLXDC1Q8IUK5 500 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 CCDC103Q8IW40 242 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 PIGKQ92643 395 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 RIT1Q92963 219 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 CCDC74AQ96AQ1 378 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 PRRC1Q96M27 445 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 CD180Q99467 661 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 ARHGDIGQ99819 225 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 LIN28AQ9H9Z2 209 aaKnown RBP15.52■□□□□ 0.08
USHBP1-203ENST00000431146 MRPS33Q9Y291 106 aaKnown RBP15.52■□□□□ 0.08
USHBP1-203ENST00000431146 DTX4Q9Y2E6 619 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 CFAP54Q96N23 3096 aa15.52■□□□□ 0.08
USHBP1-203ENST00000431146 ARRDC5A6NEK1 342 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 HYAL3O43820 417 aaPredicted RBP15.52■□□□□ 0.07
USHBP1-203ENST00000431146 CTNSO60931 367 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 FAM20BO75063 409 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 TDGF1P13385 188 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 FOLR1P15328 257 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 CHMP24386 653 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 NUP107P57740 925 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 TAS2R41P59536 307 aa15.52■□□□□ 0.07
USHBP1-203ENST00000431146 CSTF1Q05048 431 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms