RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 A0A0G2JNJ9 132 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 NKX2-6A6NCS4 301 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 PDPK1O15530 556 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 TRAPPC6AO75865 159 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 SLITRK5O94991 958 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 CHEK2O96017 543 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 MYZAPP0CAP1 466 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 SERPINB5P36952 375 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 HSPB3Q12988 150 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 SNTA1Q13424 505 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 WIPI1Q5MNZ9 446 aaPredicted RBP17.47■□□□□ 0.39
COL9A2-204ENST00000427563 C1orf185Q5T7R7 199 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 WLSQ5T9L3 541 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 LARP4Q71RC2 724 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL9A2-204ENST00000427563 ULK2Q8IYT8 1036 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 ZNF295-AS1Q8N0V1 137 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 FAM83FQ8NEG4 500 aaPredicted RBP17.47■□□□□ 0.39
COL9A2-204ENST00000427563 OR1J4Q8NGS1 313 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 LILRB4Q8NHJ6 448 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 HOXB13Q92826 284 aaPredicted RBP17.47■□□□□ 0.39
COL9A2-204ENST00000427563 TIMP4Q99727 224 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 RTN4RQ9BZR6 473 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 TRIM8Q9BZR9 551 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 CENPHQ9H3R5 247 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 SERHLQ9NQF3 203 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 ZNF446Q9NWS9 450 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 Q9UFV3 132 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 MAPRE3Q9UPY8 281 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 TMED5Q9Y3A6 229 aa17.47■□□□□ 0.39
COL9A2-204ENST00000427563 CSMD2Q7Z408 3487 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 INTS1Q8N201 2190 aaKnown RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 WDR91A4D1P6 747 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 FIGNL2A6NMB9 653 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 WDR1O75083 606 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 PEX11AO75192 247 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 COQ9O75208 318 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 SKAP2O75563 359 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 SASH3O75995 380 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 TOXO94900 526 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 IFI6P09912 130 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 CYP4B1P13584 511 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 EFNA1P20827 205 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 ELAVL4P26378 380 aaKnown RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 CHRNB4P30926 498 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 MAP3K8P41279 467 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 WNT3P56703 355 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 GAB1Q13480 694 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 B3GNT6Q6ZMB0 384 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 YRDCQ86U90 279 aaKnown RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 LIX1LQ8IVB5 337 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 MCEMP1Q8IX19 187 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 CA5BP1Q8WTZ4 195 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 GIMAP5Q96F15 307 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 TREX2Q9BQ50 279 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 LMF2Q9BU23 707 aaKnown RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 UGT2B28Q9BY64 529 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 TMBIM4Q9HC24 238 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 SSU72Q9NP77 194 aaKnown RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 NPDC1Q9NQX5 325 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 DDX18Q9NVP1 670 aaKnown RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 COQ3Q9NZJ6 369 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 KLRF1Q9NZS2 232 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 FBXL2Q9UKC9 423 aa17.46■□□□□ 0.39
COL9A2-204ENST00000427563 NUP214P35658 2090 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-204ENST00000427563 C15orf38-AP3S2A0A0A6YYH1 394 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 GXYLT2A0PJZ3 443 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 FAM90A27PA6NNH2 459 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 BMP7P18075 431 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 PNLIPRP2P54317 469 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 NHSL2Q5HYW2 709 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 C6orf136Q5SQH8 315 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 VASNQ6EMK4 673 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 NUDCD3Q8IVD9 361 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 LIX1Q8N485 282 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 OR7A2PQ8NGA2 310 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 PPCDCQ96CD2 204 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 C1orf50Q9BV19 199 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 PRDM14Q9GZV8 571 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 ENKD1Q9H0I2 346 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 ALKBH4Q9NXW9 302 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 NTMQ9P121 344 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 ATP6V1HQ9UI12 483 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 PCDHGB3Q9Y5G1 929 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 WIF1Q9Y5W5 379 aa17.45■□□□□ 0.38
COL9A2-204ENST00000427563 ABCB7O75027 752 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 IGKV1D-16P01601 117 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 IGFBP2P18065 325 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 EFR3AQ14156 821 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 PTGR1Q14914 329 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 CHI3L2Q15782 390 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 OR5M10Q6IEU7 315 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 ACAD11Q709F0 780 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 ZNF781Q8N8C0 355 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 NAXEQ8NCW5 288 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 ASB5Q8WWX0 329 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 TMCO6Q96DC7 493 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 WDYHV1Q96HA8 205 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 PPP3R2Q96LZ3 170 aa17.44■□□□□ 0.38
COL9A2-204ENST00000427563 SORT1Q99523 831 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms