RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 TRIM13O60858 407 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 ASCL1P50553 236 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 RCAN2Q14206 197 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 TMEM200AQ86VY9 491 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 IFNEQ86WN2 208 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 OR2W6PQ8NHA6 318 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 ZPLD1Q8TCW7 415 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 APOPT1Q96IL0 206 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 EGLN2Q96KS0 407 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 AMDHD1Q96NU7 426 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 TRMOQ9BU70 441 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 DDX18Q9NVP1 670 aaKnown RBP23.2■■□□□ 1.3
SMDT1-202ENST00000422252 C1orf109Q9NX04 203 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 MKS1Q9NXB0 559 aa23.2■■□□□ 1.3
SMDT1-202ENST00000422252 MBD3L4A6NDZ8 208 aaPredicted RBP23.19■■□□□ 1.3
SMDT1-202ENST00000422252 MBD3L3A6NE82 208 aaPredicted RBP23.19■■□□□ 1.3
SMDT1-202ENST00000422252 MBD3L5A6NJ08 208 aaPredicted RBP23.19■■□□□ 1.3
SMDT1-202ENST00000422252 UPK1AO00322 258 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 SYT5O00445 386 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 CPN1P15169 458 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 TACR1P25103 407 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 SRD5A2P31213 254 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 UQCRC1P31930 480 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 ZNF136P52737 540 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 SH2D4BQ5SQS7 431 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 POMZP3Q6PJE2 187 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 ENPP6Q6UWR7 440 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 OR2L13Q8N349 312 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 RIBC1Q8N443 379 aaPredicted RBP23.19■■□□□ 1.3
SMDT1-202ENST00000422252 MBD3L2Q8NHZ7 208 aaPredicted RBP23.19■■□□□ 1.3
SMDT1-202ENST00000422252 LRRC46Q96FV0 321 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 LRTM1Q9HBL6 345 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 TAS2R10Q9NYW0 307 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 FBXL2Q9UKC9 423 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 FIS1Q9Y3D6 152 aa23.19■■□□□ 1.3
SMDT1-202ENST00000422252 ZWINTO95229 277 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 PSMG1O95456 288 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 CYP4B1P13584 511 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 GRK2P25098 689 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 PEX19P40855 299 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 GAS1P54826 345 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 CYP27C1Q4G0S4 372 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 OR5M10Q6IEU7 315 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 RNF165Q6ZSG1 346 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 Q6ZSR9 355 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 TRIM42Q8IWZ5 723 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 BANPQ8N9N5 519 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 ELP4Q96EB1 424 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 SH3GL2Q99962 352 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 DKKL1Q9UK85 242 aa23.18■■□□□ 1.3
SMDT1-202ENST00000422252 MRPS18CQ9Y3D5 142 aaKnown RBP23.18■■□□□ 1.3
SMDT1-202ENST00000422252 CHEK2O96017 543 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 NUDT17P0C025 328 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 NEFHP12036 1026 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 POU3F2P20265 443 aaPredicted RBP23.17■■□□□ 1.3
SMDT1-202ENST00000422252 EVI2BP34910 448 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 GFRA1P56159 465 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 SNTB1Q13884 538 aaKnown RBP23.17■■□□□ 1.3
SMDT1-202ENST00000422252 FBXL19-AS1Q494R0 122 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 KANK2Q63ZY3 851 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 TRABD2AQ86V40 505 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 OR2T11Q8NH01 316 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 GFM2Q969S9 779 aaKnown RBP23.17■■□□□ 1.3
SMDT1-202ENST00000422252 FCRL1Q96LA6 429 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 TUBA1CQ9BQE3 449 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 CBLCQ9ULV8 474 aa23.17■■□□□ 1.3
SMDT1-202ENST00000422252 KIAA1549Q9HCM3 1950 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 H0Y3Z8 333 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 IFI6P09912 130 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 CTSSP25774 331 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 KIR2DL3P43628 341 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 VSNL1P62760 191 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 SRYQ05066 204 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 GAB1Q13480 694 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 ZNHIT3Q15649 155 aaPredicted RBP23.16■■□□□ 1.3
SMDT1-202ENST00000422252 DECR1Q16698 335 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 AAGABQ6PD74 315 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 HOMEZQ8IX15 550 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 ZZZ3Q8IYH5 903 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 RNASE6Q93091 150 aaKnown RBP23.16■■□□□ 1.3
SMDT1-202ENST00000422252 ZNF764Q96H86 408 aaPredicted RBP23.16■■□□□ 1.3
SMDT1-202ENST00000422252 FAM111AQ96PZ2 611 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 CCT7Q99832 543 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 TUBB1Q9H4B7 451 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 Q9N2J8 555 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 PPP4R1LQ9P1A2 415 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 FOXD3Q9UJU5 478 aaPredicted RBP23.16■■□□□ 1.3
SMDT1-202ENST00000422252 DNAJC15Q9Y5T4 150 aa23.16■■□□□ 1.3
SMDT1-202ENST00000422252 PDPK1O15530 556 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 SCO2O43819 266 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 LINC00032P0C843 101 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 ALDH3A1P30838 453 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 ZNF551Q7Z340 670 aaPredicted RBP23.15■■□□□ 1.3
SMDT1-202ENST00000422252 C9orf106Q8NAJ2 232 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 OR4K17Q8NGC6 315 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 SFXN2Q96NB2 322 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 LMF2Q9BU23 707 aaKnown RBP23.15■■□□□ 1.3
SMDT1-202ENST00000422252 LGALS13Q9UHV8 139 aa23.15■■□□□ 1.3
SMDT1-202ENST00000422252 MRTO4Q9UKD2 239 aaKnown RBP23.15■■□□□ 1.3
SMDT1-202ENST00000422252 ABCG2Q9UNQ0 655 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms