RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CCDC107Q8WV48 283 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FAM151AQ8WW52 585 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 HTR3CQ8WXA8 447 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ATL1Q8WXF7 558 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 S100ZQ8WXG8 99 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 HSD17B8Q92506 261 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SEPT8Q92599 483 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CASP10Q92851 521 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SLC35B4Q969S0 331 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.41□□□□□ -2.021e-6■■■■□ 20.6
VPS41-206ENST00000418457 TMEM143Q96AN5 459 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZNF524Q96C55 264 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 C12orf43Q96C57 262 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 ROPN1LQ96C74 230 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ISOC1Q96CN7 298 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RCN3Q96D15 328 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FBXO17Q96EF6 278 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ARSGQ96EG1 525 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PGAP3Q96FM1 320 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 CERS2Q96G23 380 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PLEKHA8Q96JA3 519 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SLC45A3Q96JT2 553 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SPATA13Q96N96 652 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SFXN2Q96NB2 322 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RDH12Q96NR8 316 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PPP1R2P1Q96PQ5 205 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RANBP9Q96S59 729 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SERINC2Q96SA4 455 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CYP2S1Q96SQ9 504 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 VAT1Q99536 393 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RBBP8Q99708 897 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PKP2Q99959 881 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 HOPXQ9BPY8 73 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 SLC25A23Q9BV35 468 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FTHL17Q9BXU8 183 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 C20orf27Q9GZN8 174 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TRPV6Q9H1D0 765 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RSPH9Q9H1X1 276 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 C2orf40Q9H1Z8 148 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PORCNQ9H237 461 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 NOL11Q9H8H0 719 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 LRRC40Q9H9A6 602 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 GPN2Q9H9Y4 310 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 CXorf21Q9HAI6 301 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PARVBQ9HBI1 364 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 NMRAL1Q9HBL8 299 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 EML4Q9HC35 981 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 ANKHQ9HCJ1 492 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 HMG20AQ9NP66 347 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SLC52A3Q9NQ40 469 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PFDN4Q9NQP4 134 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 XPNPEP1Q9NQW7 623 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PXMP2Q9NR77 195 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 NRBP2Q9NSY0 501 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.41□□□□□ -2.02
VPS41-206ENST00000418457 PRMT7Q9NVM4 692 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 PKD2L2Q9NZM6 624 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 B3GAT1Q9P2W7 334 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PCSK1NQ9UHG2 260 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 EMCNQ9ULC0 261 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ERGIC3Q9Y282 383 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PADI2Q9Y2J8 665 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RNF11Q9Y3C5 154 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FAM32AQ9Y421 112 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 PTPRJQ12913 1337 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RALGAPA2Q2PPJ7 1873 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 A0A1W2PN81 502 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ISPDA4D126 451 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 LRRIQ4A6NIV6 560 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CLDN25C9JDP6 229 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 G3V2L1 256 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 H3BMQ9 156 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 M0QYV0 167 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PSMD12O00232 456 aaPredicted RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 MRASO14807 208 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 XPO1O14980 1071 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 LSM1O15116 133 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 PFDN6O15212 129 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SLC22A1O15245 554 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CFLARO15519 480 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SULT1C4O75897 302 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CLPXO76031 633 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SUPT7LO94864 414 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 STBD1O95210 358 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 PIGNO95427 931 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CPNE6O95741 557 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CCNE2O96020 404 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 HPRP00739 348 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CALCAP01258 141 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 GPIP06744 558 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 RAB40ALP0C0E4 278 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 SUPT20HL2P0C7V6 817 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 ZNF24P17028 368 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 POLR2EP19388 210 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 TCEA1P23193 301 aaKnown RBP2.4□□□□□ -2.03
VPS41-206ENST00000418457 JAK1P23458 1154 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CPT2P23786 658 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 CYP2F1P24903 491 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 FASP25445 335 aa2.4□□□□□ -2.03
VPS41-206ENST00000418457 MT3P25713 68 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms