RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PRAMEF25A6NGN4 478 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 GNB5O14775 395 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 BCKDKO14874 412 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 FADS1O60427 444 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 ABCB7O75027 752 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 ERLIN1O75477 346 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 REM1O75628 298 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 MYZAPP0CAP1 466 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 G6PDP11413 515 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 ESRRAP11474 423 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 PRPS2P11908 318 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 CYP4B1P13584 511 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 EFNA1P20827 205 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 GDF1P27539 372 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 MAN2A2P49641 1150 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 RPL14P50914 215 aaKnown RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 PNLIPRP2P54317 469 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 MAGOHP61326 146 aaKnown RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 RPP38P78345 283 aaKnown RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 EMX2Q04743 252 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 CRYZQ08257 329 aaKnown RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 ZNF155Q12901 538 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 CASP8Q14790 479 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 PDCD2Q16342 344 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 SMU1Q2TAY7 513 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 XKRXQ6PP77 449 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 LARP4Q71RC2 724 aaKnown RBP eCLIP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 FNDC5Q8NAU1 212 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 ACBD4Q8NC06 268 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 PSMA8Q8TAA3 256 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 EFHD2Q96C19 240 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 ZBED6CLQ96FA7 236 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 METTL7AQ9H8H3 244 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 PNPOQ9NVS9 261 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 SH3BP4Q9P0V3 963 aa18.81■□□□□ 0.6
PKNOX1-202ENST00000418336 FBN2P35556 2912 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 C19orf84I3L1E1 186 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 NKX2-2O95096 273 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 SNUPNO95149 360 aaKnown RBP18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 ELAVL4P26378 380 aaKnown RBP18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 MAPK1P28482 360 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 TRPC1P48995 793 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 ZNF630Q2M218 657 aaPredicted RBP18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 CYP27C1Q4G0S4 372 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 EIPR1Q53HC9 387 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 NHSL2Q5HYW2 709 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 DCST1Q5T197 706 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 ANGPTL8Q6UXH0 198 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 SEM1Q6ZVN7 128 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 CAMKMTQ7Z624 323 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 PACS2Q86VP3 889 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 ANKRD42Q8N9B4 389 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 PPP1R14CQ8TAE6 165 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 ARL8AQ96BM9 186 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 TUBGCP3Q96CW5 907 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 CBLCQ9ULV8 474 aa18.8■□□□□ 0.6
PKNOX1-202ENST00000418336 GXYLT2A0PJZ3 443 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 KDM4EB2RXH2 506 aaPredicted RBP18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 ANKRD28O15084 1053 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 ACP2P11117 423 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 DIO3P55073 304 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 NUP107P57740 925 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 STX3Q13277 289 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 EFR3AQ14156 821 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 R3HCC1LQ7Z5L2 792 aaKnown RBP18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 FAM110BQ8TC76 370 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 TMCO6Q96DC7 493 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 MEAF6Q9HAF1 191 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 B4GALT7Q9UBV7 327 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 FBXL2Q9UKC9 423 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 PCDHGB3Q9Y5G1 929 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 WIF1Q9Y5W5 379 aa18.79■□□□□ 0.6
PKNOX1-202ENST00000418336 PRSS44E7EML9 344 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 IL33O95760 270 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 ACVR2AP27037 513 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 HPCAL1P37235 193 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 MANFP55145 182 aaKnown RBP18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 WNT3P56703 355 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 CLDN8P56748 225 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 SP5Q6BEB4 398 aaPredicted RBP18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 VASNQ6EMK4 673 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 MFSD12Q6NUT3 480 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 FAM83FQ8NEG4 500 aaPredicted RBP18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 NUP43Q8NFH3 380 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 OR1J4Q8NGS1 313 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 PIK3R3Q92569 461 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 SARAFQ96BY9 339 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 FAM120BQ96EK7 910 aaKnown RBP18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 PPP1R36Q96LQ0 422 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 TIMP4Q99727 224 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 TTYH2Q9BSA4 534 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 OR2B2Q9GZK3 357 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 PRDM14Q9GZV8 571 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 LDAHQ9H6V9 325 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 CXorf36Q9H7Y0 433 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 SERHLQ9NQF3 203 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 KLRF1Q9NZS2 232 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 MAPRE3Q9UPY8 281 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 RNF6Q9Y252 685 aa18.78■□□□□ 0.6
PKNOX1-202ENST00000418336 KIAA1549Q9HCM3 1950 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms