RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ACAD8Q9UKU7 415 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 RASD1Q9Y272 281 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC6A5Q9Y345 797 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 DENND4AQ7Z401 1863 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 YKT6O15498 198 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SUSD5O60279 629 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 GIPP09681 153 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 DRD5P21918 477 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 HSD3B2P26439 372 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 IRF8Q02556 426 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SNTB2Q13425 540 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SDHAF4Q5VUM1 108 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 TRMT11Q7Z4G4 463 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ZER1Q7Z7L7 766 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 THEM5Q8N1Q8 247 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SPICQ8N5J4 248 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 OR4D10Q8NGI6 311 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 OR5AK3PQ8NH89 298 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 NSMAFQ92636 917 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 TMEM121BQ9BXQ6 578 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ABCG4Q9H172 646 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 HMX1Q9NP08 348 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 CYB5R1Q9UHQ9 305 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 GNG14A0A1W2PPG7 69 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ARL5CA6NH57 179 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 AGAP14A8MT82 685 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 KDM4EB2RXH2 506 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 KDM4BO94953 1096 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 UBL3O95164 117 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 URODP06132 367 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 GABRA1P14867 456 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 MMP11P24347 488 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 CRYBB1P53674 252 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SMIM11AP58511 58 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 RAP2BP61225 183 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 DGCR2P98153 550 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 TWF1Q12792 350 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 CRHR2Q13324 411 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 DYRK1AQ13627 763 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 KLF9Q13886 244 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 LYPLAL1Q5VWZ2 237 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 DEF8Q6ZN54 512 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 KLHL36Q8N4N3 616 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 OR52N1Q8NH53 320 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ZDHHC1Q8WTX9 485 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF649Q9BS31 505 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 FAIM2Q9BWQ8 316 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 RSPO3Q9BXY4 272 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 FBXO44Q9H4M3 255 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 REEP4Q9H6H4 257 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 MVB12BQ9H7P6 319 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 BRF2Q9HAW0 419 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 IL26Q9NPH9 171 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 CTSFQ9UBX1 484 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SZT2Q5T011 3432 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 F5H5T6 163 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 M0QZQ0 153 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 WNT1P04628 370 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 C8GP07360 202 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RPL17P18621 184 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 TIA1P31483 386 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC6A11P48066 632 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 KCNJ5P48544 419 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RAB13P51153 203 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 DOC2AQ14183 400 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 HFEQ30201 348 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF791Q3KP31 576 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 METTL11BQ5VVY1 283 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC30A6Q6NXT4 461 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SFXN4Q6P4A7 337 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 DNAJB7Q7Z6W7 309 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 LRRC56Q8IYG6 542 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CAMKVQ8NCB2 501 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM71CQ8NEG0 241 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR11G2Q8NGC1 345 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR5M9Q8NGP3 310 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 TRMT10AQ8TBZ6 339 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 LPPQ93052 612 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 KATNBL1Q9H079 304 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 BTBD1Q9H0C5 482 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 DNTTIP1Q9H147 329 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 FN3KQ9H479 309 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 WDR26Q9H7D7 661 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GKN1Q9NS71 199 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 MGAT4CQ9UBM8 478 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR52Q9Y2T5 361 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PCDHB9Q9Y5E1 797 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 A0A1B0GUH1 482 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 TRABD2BA6NFA1 517 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 B4GALT3O60512 393 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 HPP00738 406 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 EPHX1P07099 455 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ALPIP09923 528 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 TYRP14679 529 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PPP3CBP16298 524 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PFN3P60673 137 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 DEFA5Q01523 94 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms