RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZDHHC11Q9H8X9 412 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 NTMQ9P121 344 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 USH1CQ9Y6N9 552 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 NBASA2RRP1 2371 aa13.49□□□□□ -0.25
CHD1-202ENST00000414220 UQCRHLA0A096LP55 91 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 TRGV5A0A0B4J1U4 118 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 A0A0G2JMM0 328 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 A0A1B0GTH9 108 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 A0A1W2PPB8 328 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 A0A1W2PRS3 328 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 CLEC18AA5D8T8 446 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 OR14I1A6ND48 311 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 KIR3DP1A8MWS1 328 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 CCL21O00585 134 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 BCKDKO14874 412 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 SUSD5O60279 629 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 TSPAN2O60636 221 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 HCN1O60741 890 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 TRIM3O75382 744 aaPredicted RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 TRAPPC6AO75865 159 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 PSMG1O95456 288 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 C6orf47O95873 294 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 EFNA1P20827 205 aaPredicted RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 SOAT1P35610 550 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 RFX3P48380 749 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 GSTA3Q16772 222 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 C1QL3Q5VWW1 255 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 CLEC18BQ6UXF7 455 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 NPSR1Q6W5P4 371 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 CLEC18CQ8NCF0 446 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 PSMA8Q8TAA3 256 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 SFXN5Q8TD22 340 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 ADAMTS15Q8TE58 950 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 JADE3Q92613 823 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 TESCQ96BS2 214 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 EFHD2Q96C19 240 aaPredicted RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 FAM120BQ96EK7 910 aaKnown RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 NODALQ96S42 347 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 G6PC3Q9BUM1 346 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 AIG1Q9NVV5 245 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 SH3BGRL2Q9UJC5 107 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 ERRFI1Q9UJM3 462 aaPredicted RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 ZNF835Q9Y2P0 537 aa13.48□□□□□ -0.25
CHD1-202ENST00000414220 HELZ2Q9BYK8 2649 aaKnown RBP13.48□□□□□ -0.25
CHD1-202ENST00000414220 DUXAA6NLW8 204 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 E9PBE3 544 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 GNB5O14775 395 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 UBDO15205 165 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 POLR3GO15318 223 aaPredicted RBP13.47□□□□□ -0.25
CHD1-202ENST00000414220 ICOSLGO75144 302 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 SEMA7AO75326 666 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 CBR3O75828 277 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 SASH3O75995 380 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 NKX2-2O95096 273 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 IL33O95760 270 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 IGHG3P01860 377 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 TPOP07202 933 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 HPGDP15428 266 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 STX1BP61266 288 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 TIGD3Q6B0B8 471 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 MFSD12Q6NUT3 480 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 ANGPTL8Q6UXH0 198 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 Q6ZPB1 254 aaPredicted RBP13.47□□□□□ -0.25
CHD1-202ENST00000414220 TRIML2Q8N7C3 387 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 COX18Q8N8Q8 333 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 OR4N2Q8NGD1 307 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 FAM57AQ8TBR7 257 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 CKAP2Q8WWK9 683 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 MAELQ96JY0 434 aaKnown RBP13.47□□□□□ -0.25
CHD1-202ENST00000414220 STACQ99469 402 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 ACTRT3Q9BYD9 372 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 ZNF703Q9H7S9 590 aaPredicted RBP13.47□□□□□ -0.25
CHD1-202ENST00000414220 PROK2Q9HC23 129 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 ACKR4Q9NPB9 350 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 FAM120CQ9NX05 1096 aaKnown RBP13.47□□□□□ -0.25
CHD1-202ENST00000414220 GIN1Q9NXP7 522 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 ACAD8Q9UKU7 415 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 ABCG2Q9UNQ0 655 aa13.47□□□□□ -0.25
CHD1-202ENST00000414220 A0A1B0GVC2 190 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 AQP7O14520 342 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 ATP8B1O43520 1251 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 NME6O75414 186 aaPredicted RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 SLC22A3O75751 556 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 ZIC2O95409 532 aaPredicted RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 CPSF4O95639 269 aaKnown RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 HMGN2P05204 90 aaKnown RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 IL6P05231 212 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 ATP6V1C1P21283 382 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 LCN1P31025 176 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 SMSP52788 366 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 POU6F2P78424 691 aaPredicted RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 HSF1Q00613 529 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 LASP1Q14847 261 aaKnown RBP13.46□□□□□ -0.25
CHD1-202ENST00000414220 SF3B4Q15427 424 aaKnown RBP eCLIP13.46□□□□□ -0.25
CHD1-202ENST00000414220 C3AR1Q16581 482 aa13.46□□□□□ -0.25
CHD1-202ENST00000414220 SLC9B1Q4ZJI4 515 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms